ggKbase home page

13_2_20cm_scaffold_1355

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1355_1
unknown

Not on your lists

3..131
DNA (129bp) protein (43aa)

This feature has no annotations

13_2_20cm_scaffold_1355_2
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

247..927
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A40E5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM38050.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" s
13_2_20cm_scaffold_1355_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1019..1552
DNA (534bp) protein (178aa)
id=14625994 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_2_20cm_scaffold_1355_4
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1588..2052)
DNA (465bp) protein (155aa)
hypothetical protein id=720973 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein Tax=RBG_16_Ignavibacteria_35_7_curated
hypothetical protein
13_2_20cm_scaffold_1355_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(2136..4406)
DNA (2271bp) protein (757aa)
Glycosyl transferase group 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3R1_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EDY18891.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rfaG; PHP family phosphoesterase fused to glycosyltransferase
13_2_20cm_scaffold_1355_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4541..5350)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3R3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18893.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
deacetylase
13_2_20cm_scaffold_1355_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5474..5887)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW00_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21592.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_scaffold_1355_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

6045..6689
DNA (645bp) protein (215aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spa
Thymidylate kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAI4_9BACT
thymidylate kinase
13_2_20cm_scaffold_1355_9
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

6692..7129
DNA (438bp) protein (146aa)
S23 ribosomal protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L3G5_9CYAN
putative S23 ribosomal protein Tax=GWA2_Ignavibacteria_54_16_curated
S23 ribosomal protein
13_2_20cm_scaffold_1355_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7224..8192
DNA (969bp) protein (323aa)
DNA polymerase III, gamma/tau subunits n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAI3_9BACT
DNA polymerase III, gamma/tau subunits {ECO:0000313|EMBL:EDY16501.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA polymerase III subunit delta'
13_2_20cm_scaffold_1355_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8320..8973
DNA (654bp) protein (218aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4A6_9BACT
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EDY18707.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus El
erfK; erfK/srfK family protein
13_2_20cm_scaffold_1355_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9110..10348
DNA (1239bp) protein (413aa)
Hydroxymethylbutenyl pyrophosphate reductase {ECO:0000313|EMBL:EDY18708.1}; EC=1.17.1.2 {ECO:0000313|EMBL:EDY18708.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.
Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4A7_9BACT rbh
lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
13_2_20cm_scaffold_1355_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10506..11348
DNA (843bp) protein (281aa)
DNA repair protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744E06 rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphae
Ku domain-containing protein
13_2_20cm_scaffold_1355_14
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

11557..11955
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037F9BB1
DoxX family protein {ECO:0000313|EMBL:KJH71061.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
hypothetical protein
13_2_20cm_scaffold_1355_15
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

11996..12820
DNA (825bp) protein (275aa)
Dienelactone hydrolase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9X9Q3_9BACT
Dienelactone hydrolase-related enzyme
Dienelactone hydrolase-related enzyme {ECO:0000313|EMBL:AIE86086.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbr
13_2_20cm_scaffold_1355_16
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

12935..13693
DNA (759bp) protein (253aa)
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I (EC:2.7.2.4); K12524 bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] Tax=GWA2_Ignavibacteria_54_16_curated
aspartate kinase (EC:1.1.1.3 2.7.2.4)
Bifunctional aspartokinase/homoserine dehydrogenase 1, (Ak-hd 1) (Ak-hsdh 1) id=4044889 bin=GWA2_Ignavibacteriae_54_16_partial species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
Displaying 16 items

View Taxonomy