ggKbase home page

13_2_20cm_scaffold_1394

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1394_1

Not on your lists

comp(164..3004)
DNA (2841bp) protein (947aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F34B69
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49067.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_2_20cm_scaffold_1394_2
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(3004..3765)
DNA (762bp) protein (254aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AN26_9BACT
DNA-directed RNA polymerase subunit sigma24 Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
RNA polymerase sigma-70 factor
13_2_20cm_scaffold_1394_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3887..4441)
DNA (555bp) protein (185aa)
FeS assembly SUF system protein SufT n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU96_9BACT
FeS assembly SUF system protein SufT {ECO:0000313|EMBL:EDY22134.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
paaD; metal-sulfur cluster biosynthetic enzyme
13_2_20cm_scaffold_1394_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4568..5668)
DNA (1101bp) protein (367aa)
FAD-binding domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWY6_9BACT
FAD-binding domain protein {ECO:0000313|EMBL:EDY21306.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Assimilatory nitrate reductase large subunit
13_2_20cm_scaffold_1394_5
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5892..7964)
DNA (2073bp) protein (691aa)
phosphoesterase n=1 Tax=Burkholderia kururiensis RepID=UPI00037D439E
Phosphoesterase {ECO:0000313|EMBL:EEA04084.1}; Flags: Precursor;; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkhol
phosphoesterase
13_2_20cm_scaffold_1394_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(8099..10342)
DNA (2244bp) protein (748aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spa
Ribonuclease R n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6L0_9BACT rbh
ribonuclease R
13_2_20cm_scaffold_1394_7
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

10406..10924
DNA (519bp) protein (173aa)
PEBP family protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E733_METEZ
PEBP family protein; K06910 Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
PEBP family protein
13_2_20cm_scaffold_1394_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11042..11896
DNA (855bp) protein (285aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
Dihydropteroate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2A5_9BACT
dihydropteroate synthase
13_2_20cm_scaffold_1394_9

Not on your lists

11893..12768
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2A6_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48990.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_2_20cm_scaffold_1394_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12814..13284)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D712_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17663.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_scaffold_1394_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13668..14798
DNA (1131bp) protein (377aa)
Cell cycle protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVG6_9BACT
Cell cycle protein {ECO:0000313|EMBL:EDY21408.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rodA; Rod shape-determining protein rodA
13_2_20cm_scaffold_1394_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14815..15537
DNA (723bp) protein (241aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7X7_9BACT
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
scpA; chromosome segregation and condensation protein ScpA
13_2_20cm_scaffold_1394_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15643..16521
DNA (879bp) protein (293aa)
shikimate kinase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174641E
ActC family protein {ECO:0000313|EMBL:EDY20026.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
NAD-dependent epimerase/dehydratase
13_2_20cm_scaffold_1394_14
unknown

Not on your lists

comp(16576..16977)
DNA (402bp) protein (134aa)

This feature has no annotations

Displaying 14 items

View Taxonomy