ggKbase home page

13_2_20cm_scaffold_219

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_219_1
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1224)
DNA (1224bp) protein (408aa)
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RWI9_MYCRN
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain {ECO:0000313|EMBL:AEV73121.1}; TaxID=710685 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteria
13_2_20cm_scaffold_219_2
unknown

Not on your lists

comp(1221..2423)
DNA (1203bp) protein (401aa)

This feature has no annotations

13_2_20cm_scaffold_219_3
unknown

Not on your lists

2474..2860
DNA (387bp) protein (129aa)

This feature has no annotations

13_2_20cm_scaffold_219_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(2699..3457)
DNA (759bp) protein (253aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3P8_9BACT
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EDY18878.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus El
ErfK/YbiS/YcfS/YnhG family protein
13_2_20cm_scaffold_219_5

Not on your lists

3947..4465
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746122
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:EQD34960.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
CRISPR-associated helicase Cas3
13_2_20cm_scaffold_219_6

Not on your lists

4579..6948
DNA (2370bp) protein (790aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NM4_SOLUE
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49190.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_2_20cm_scaffold_219_7
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7196..7567
DNA (372bp) protein (124aa)
Methyltransferase type 11 n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPM2_SIDLE
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ADE13017.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans litho
13_2_20cm_scaffold_219_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8865..11732)
DNA (2868bp) protein (956aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV98_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39202.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_2_20cm_scaffold_219_9
unknown

Not on your lists

comp(11829..12434)
DNA (606bp) protein (202aa)

This feature has no annotations

13_2_20cm_scaffold_219_10
Thermus sp. CCB_US3_UF1, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(13178..13831)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034C12E9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV16768.1}; TaxID=1111069 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. CCB_US3_UF1.;"
13_2_20cm_scaffold_219_11
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13828..14298)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJU4_9BACT
hypothetical protein Tax=RBG_16_Gallionellales_57_15_curated
hypothetical protein
13_2_20cm_scaffold_219_12
unknown

Not on your lists

14405..14677
DNA (273bp) protein (91aa)

This feature has no annotations

13_2_20cm_scaffold_219_13
unknown

Not on your lists

14997..15659
DNA (663bp) protein (221aa)

This feature has no annotations

13_2_20cm_scaffold_219_14
unknown

Not on your lists

15632..16054
DNA (423bp) protein (141aa)

This feature has no annotations

13_2_20cm_scaffold_219_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(16123..17832)
DNA (1710bp) protein (570aa)
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:EDY18992.1}; EC=1.8.1.9 {ECO:0000313|EMBL:EDY18992.1};; TaxID=497964 species="Bacteria; Verruc
trxB; thioredoxin reductase (EC:1.8.1.9)
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D412_9BACT rbh
13_2_20cm_scaffold_219_16
Paenibacillus sp. MAEPY2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17939..18682
DNA (744bp) protein (248aa)
short-chain dehydrogenase n=1 Tax=Curtobacterium sp. B8 RepID=UPI000348D8B4
Short-chain dehydrogenase {ECO:0000313|EMBL:KGP80389.1}; TaxID=1395587 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MAEPY2.;"
short-chain dehydrogenase/reductase SDR
13_2_20cm_scaffold_219_17
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(18726..20126)
DNA (1401bp) protein (467aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTK9_9CHLR rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFH83760.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobac
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_2_20cm_scaffold_219_18
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20367..20615)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F9T7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV08681.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium met
hypothetical protein
13_2_20cm_scaffold_219_19
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20696..21160)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Serratia sp. S4 RepID=UPI0003623B46
hypothetical protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
hypothetical protein
13_2_20cm_scaffold_219_20
unknown

Not on your lists

21244..21552
DNA (309bp) protein (103aa)

This feature has no annotations

13_2_20cm_scaffold_219_21
Pseudomonas sp. GM30, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21583..21885)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM30 RepID=J3FF45_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EUB84709.1}; TaxID=1144328 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G
hypothetical protein
13_2_20cm_scaffold_219_22
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23014..23652
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000364F695
Uncharacterized protein {ECO:0000313|EMBL:KFF22358.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
DNA resolvase
13_2_20cm_scaffold_219_23

Not on your lists

comp(24057..26183)
DNA (2127bp) protein (709aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B364C3 rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48716.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_2_20cm_scaffold_219_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(26597..27694)
DNA (1098bp) protein (366aa)
Primase 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXL0_9BACT
Primase 1 {ECO:0000313|EMBL:EDY21008.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_scaffold_219_25

Not on your lists

comp(27691..28584)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI000372D64E
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48709.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_2_20cm_scaffold_219_26
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(28578..28838)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZY24_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB75223.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-
13_2_20cm_scaffold_219_27
unknown

Not on your lists

29233..29475
DNA (243bp) protein (81aa)

This feature has no annotations

13_2_20cm_scaffold_219_28
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

29604..30545
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALMg2 RepID=UPI00035FBC62
hypothetical protein Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
hypothetical protein
13_2_20cm_scaffold_219_29
unknown

Not on your lists

comp(30486..30719)
DNA (234bp) protein (78aa)

This feature has no annotations

13_2_20cm_scaffold_219_30
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

30962..31705
DNA (744bp) protein (248aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUB3_9BACT
BadM/Rrf2 family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
BadM/Rrf2 family transcriptional regulator
Displaying items 1-30 of 32 in total

View Taxonomy