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13_2_20cm_scaffold_227

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_227_1

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comp(1..159)
DNA (159bp) protein (53aa)
Chaperone of endosialidase {ECO:0000313|EMBL:AIA12604.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_2_20cm_scaffold_227_2
unknown

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comp(642..905)
DNA (264bp) protein (88aa)

This feature has no annotations

13_2_20cm_scaffold_227_3
unknown

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comp(960..1103)
DNA (144bp) protein (48aa)

This feature has no annotations

13_2_20cm_scaffold_227_4
Kangiella geojedonensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1746..3008
DNA (1263bp) protein (421aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7R6T9_KANKD
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AKE51080.1}; Flags: Precursor;; TaxID=914150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracace
peptidase S8/S53 subtilisin kexin sedolisin
13_2_20cm_scaffold_227_5
unknown

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comp(3179..3436)
DNA (258bp) protein (86aa)

This feature has no annotations

13_2_20cm_scaffold_227_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3904..4470)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XTR8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON22747.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
13_2_20cm_scaffold_227_7
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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5226..5798
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000372F302
flavoprotein Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
NADPH-dependent FMN reductase
13_2_20cm_scaffold_227_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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5806..6195
DNA (390bp) protein (130aa)
Class I peptide chain release factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0X2_9BACT
Class I peptide chain release factor {ECO:0000313|EMBL:EDY19984.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
peptide chain release factor
13_2_20cm_scaffold_227_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(6331..7242)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6H7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18086.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_2_20cm_scaffold_227_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(7714..9594)
DNA (1881bp) protein (627aa)
gyrA; DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
DNA gyrase subunit A n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D634_9BACT
gyrA; DNA gyrase subunit A
13_2_20cm_scaffold_227_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(9591..10235)
DNA (645bp) protein (215aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomi
DNA gyrase subunit A n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGG7_9BACT
Suspect SCG annotation. See neighboring gene [13_2_20cm_scaffold_227_10].
gyrA; DNA gyrase subunit A
13_2_20cm_scaffold_227_12
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(10247..11026)
DNA (780bp) protein (260aa)
UPI0003CE5E06 related cluster n=1 Tax=unknown RepID=UPI0003CE5E06
Stf0 sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:CQD04629.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
13_2_20cm_scaffold_227_13
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11035..13605)
DNA (2571bp) protein (857aa)
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGG8_9BACT rbh
13_2_20cm_scaffold_227_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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13830..14462
DNA (633bp) protein (211aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacte
Phosphatidylserine decarboxylase related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU99_9BACT
psd; phosphatidylserine decarboxylase
13_2_20cm_scaffold_227_15
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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14462..15289
DNA (828bp) protein (276aa)
pssA; phosphatidylserine synthase; K00998 phosphatidylserine synthase [EC:2.7.8.8] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
CDP-diacylglycerol/serine O-phosphatidyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUA0_9BACT
pssA; phosphatidylserine synthase
13_2_20cm_scaffold_227_16
Acidobacteriaceae bacterium KBS 89, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(15477..16001)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000376BE7F
13_2_20cm_scaffold_227_17
unknown

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comp(16200..17414)
DNA (1215bp) protein (405aa)
hypothetical protein
13_2_20cm_scaffold_227_18
unknown

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comp(17657..19207)
DNA (1551bp) protein (517aa)

This feature has no annotations

13_2_20cm_scaffold_227_19
unknown

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comp(19386..19949)
DNA (564bp) protein (188aa)

This feature has no annotations

13_2_20cm_scaffold_227_20

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20085..20837
DNA (753bp) protein (251aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ22_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49139.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RNA polymerase sigma-70 factor
13_2_20cm_scaffold_227_21

Not on your lists

20837..21292
DNA (456bp) protein (152aa)
Probable serine/threonine-protein kinase pknB n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CC80_9PLAN
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49140.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
WD domain, G-beta repeat-containing protein,protein kinase family protein
13_2_20cm_scaffold_227_22

Not on your lists

21306..22352
DNA (1047bp) protein (349aa)
pknD; serine/threonine protein kinase (EC:2.7.11.1)
Serine/threonine protein kinase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QJC5_9CYAN
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49140.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_2_20cm_scaffold_227_23

Not on your lists

22352..23536
DNA (1185bp) protein (395aa)
cya-3; adenylate cyclase 3 (EC:4.6.1.1) id=17440480 bin=RBG_16_Aminicenantes_63_14 species=Dyella japonica genus=Dyella taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49067.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_2_20cm_scaffold_227_24

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23701..25746
DNA (2046bp) protein (682aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B364C3
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49190.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_2_20cm_scaffold_227_25

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comp(25779..26495)
DNA (717bp) protein (239aa)
Nucleotidyl transferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1E1_9BACT rbh
Nucleotidyl transferase {ECO:0000313|EMBL:AIA17367.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase
13_2_20cm_scaffold_227_26
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(26590..29634)
DNA (3045bp) protein (1015aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INL6_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF41534.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
hypothetical protein
13_2_20cm_scaffold_227_27
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(29873..30871)
DNA (999bp) protein (333aa)
FTR1 family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4T9_ACIC5
FTR1 family protein
FTR1 family protein {ECO:0000313|EMBL:ACO31791.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC
13_2_20cm_scaffold_227_28
Pseudanabaena sp. PCC 7367, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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31174..31785
DNA (612bp) protein (204aa)
putative methyltransferase n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002378873
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AFY71847.1}; TaxID=82654 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena sp. PCC 7367.;"
13_2_20cm_scaffold_227_29
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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31960..32364
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D853_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17407.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_2_20cm_scaffold_227_30
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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32351..32767
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D854_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17408.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Displaying items 1-30 of 85 in total

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