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13_2_20cm_scaffold_266

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_266_1
unknown

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3..425
DNA (423bp) protein (141aa)

This feature has no annotations

13_2_20cm_scaffold_266_2
unknown

Not on your lists

comp(608..820)
DNA (213bp) protein (71aa)

This feature has no annotations

13_2_20cm_scaffold_266_3

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comp(1103..1678)
DNA (576bp) protein (192aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48586.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_2_20cm_scaffold_266_4
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1843..4623)
DNA (2781bp) protein (927aa)
Methionine synthase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLZ0_THISH
Methionine synthase {ECO:0000313|EMBL:ACL71743.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibr
metH; B12-dependent methionine synthase
13_2_20cm_scaffold_266_5

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comp(4620..5720)
DNA (1101bp) protein (367aa)
Methionine synthase n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UNQ8_AKKM8
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48588.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
methionine synthase
13_2_20cm_scaffold_266_6

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6017..7249
DNA (1233bp) protein (411aa)
Putative metabolite transport protein YjhB n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XE32_RHIFR
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48590.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
yjhB; metabolite transport protein YjhB
13_2_20cm_scaffold_266_7

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comp(7246..7980)
DNA (735bp) protein (245aa)
Cell wall hydrolase/autolysin n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6I8_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48591.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
lytC; N-acetylmuramoyl-L-alanine amidase
13_2_20cm_scaffold_266_8

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8135..9409
DNA (1275bp) protein (425aa)
Polysaccharide deacetylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X8_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48592.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
polysaccharide deacetylase
13_2_20cm_scaffold_266_9

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9432..10925
DNA (1494bp) protein (498aa)
Signal recognition particle protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X7_9BACT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured
signal recognition particle protein
13_2_20cm_scaffold_266_10

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10927..11259
DNA (333bp) protein (111aa)
30S ribosomal protein S16 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X6_9BACT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
30S ribosomal protein S16
13_2_20cm_scaffold_266_11

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11442..11672
DNA (231bp) protein (77aa)
UPF0109 protein CfE428DRAFT_2913 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X5_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48595.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_2_20cm_scaffold_266_12

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11797..12405
DNA (609bp) protein (203aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSG7_9BACT
13_2_20cm_scaffold_266_13

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comp(12550..13797)
DNA (1248bp) protein (416aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured b
fabF; 3-oxoacyl-ACP synthase II (EC:2.3.1.179)
Beta-ketoacyl synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYC3_9BACT
13_2_20cm_scaffold_266_14

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comp(13794..14249)
DNA (456bp) protein (152aa)
Cyclase/dehydrase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYC4_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48598.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cyclase/dehydrase
13_2_20cm_scaffold_266_15

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comp(14542..15729)
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKL0_KORVE
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48599.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_2_20cm_scaffold_266_16
unknown

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comp(16153..16383)
DNA (231bp) protein (77aa)

This feature has no annotations

13_2_20cm_scaffold_266_17

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16472..17158
DNA (687bp) protein (229aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBJ5_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48600.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_2_20cm_scaffold_266_18
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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17232..18314
DNA (1083bp) protein (361aa)
Bicupin, oxalate decarboxylase/oxidase n=1 Tax=Schlesneria paludicola RepID=UPI00029A874D
oxalate decarboxylase family bicupin
Bicupin, oxalate decarboxylase family {ECO:0000313|EMBL:AGA31505.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Sing
13_2_20cm_scaffold_266_19

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18428..20116
DNA (1689bp) protein (563aa)
glutamate formiminotransferase (EC:2.1.2.5)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48602.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glutamate formiminotransferase id=1883924 bin=GWE2_Bacteroidetes_32_14 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good + rbh
13_2_20cm_scaffold_266_20

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20275..21510
DNA (1236bp) protein (412aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=HUTI_SOLUE
13_2_20cm_scaffold_266_21

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21532..21681
DNA (150bp) protein (50aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48604.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_2_20cm_scaffold_266_22
unknown

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21854..21973
DNA (120bp) protein (40aa)

This feature has no annotations

13_2_20cm_scaffold_266_23

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21970..23307
DNA (1338bp) protein (446aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=77133 spec
Trigger factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1C3_9BACT
trigger factor
13_2_20cm_scaffold_266_24

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23304..24005
DNA (702bp) protein (234aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
endopeptidase Clp (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1C4_9BACT
13_2_20cm_scaffold_266_25

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24048..25301
DNA (1254bp) protein (418aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1C5_9BACT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacteri
ATP-dependent Clp protease ATP-binding subunit ClpX
13_2_20cm_scaffold_266_26

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25411..26649
DNA (1239bp) protein (413aa)
CinA-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZT4_9BACT
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
competence/damage-inducible protein CinA
13_2_20cm_scaffold_266_27
unknown

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26846..27208
DNA (363bp) protein (121aa)

This feature has no annotations

13_2_20cm_scaffold_266_28

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comp(27384..28304)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBE3_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48610.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_2_20cm_scaffold_266_29

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28327..29028
DNA (702bp) protein (234aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;
Peptidyl-prolyl cis-trans isomerase id=1870063 bin=GWD2_Nitrospirae-related_57_8 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
FKBP-type peptidylprolyl cis-trans isomerase
13_2_20cm_scaffold_266_30

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comp(29467..30036)
DNA (570bp) protein (190aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZU0_9BACT
Nicotinate-nucleotide adenylyltransferase
Displaying items 1-30 of 46 in total

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