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13_2_20cm_scaffold_2571

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2571_1
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(1..672)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI00036008FC
methyltransferase family protein Tax=RBG_13_Planctomycetes_60_9_curated
methyltransferase family protein
13_2_20cm_scaffold_2571_2
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(710..1792)
DNA (1083bp) protein (361aa)
Glycosyl transferase family 2 n=6 Tax=Clostridium thermocellum RepID=A3DK13_CLOTH rbh
glycosyl transferase family protein
Glycosyl transferase family 2 {ECO:0000313|EMBL:ABN54292.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocell
13_2_20cm_scaffold_2571_3
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1800..2183)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI00037C7658
type 11 methyltransferase Tax=GWD2_Desulfuromonadales_54_10_curated
13_2_20cm_scaffold_2571_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

2213..2671
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6N6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17837.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_scaffold_2571_5

Not on your lists

2755..4743
DNA (1989bp) protein (663aa)
Glycosyl transferase, group 1 n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174595C
Glycosyl transferases group 1 {ECO:0000313|EMBL:AIA11190.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
group 1 glycosyl transferase
13_2_20cm_scaffold_2571_6
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4740..5633
DNA (894bp) protein (298aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfurom
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BX36_ANAMD
glucose-1-phosphate thymidylyltransferase
13_2_20cm_scaffold_2571_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5702..6355)
DNA (654bp) protein (218aa)
SCO1/SenC family protein id=1947439 bin=GWD2_Deltaproteobacteria_55_8 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
SCO1/SenC family protein; K07152 Tax=GWD2_Deltaproteobacteria_55_8_curated
lipoprotein
13_2_20cm_scaffold_2571_8
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(6352..7257)
DNA (906bp) protein (302aa)
Protoheme IX farnesyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZZ9_9BACT
protoheme IX farnesyltransferase Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
protoheme IX farnesyltransferase
13_2_20cm_scaffold_2571_9
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7254..8222)
DNA (969bp) protein (323aa)
Cytochrome oxidase assembly n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XST6_9BACT
ctaA; Heme A synthase, cytochrome oxidase biogenesis protein CtaA; K02259 cytochrome c oxidase assembly protein subunit 15 Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
ctaA; Heme A synthase, cytochrome oxidase biogenesis protein CtaA
13_2_20cm_scaffold_2571_10
unknown

Not on your lists

8293..8427
DNA (135bp) protein (45aa)

This feature has no annotations

13_2_20cm_scaffold_2571_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(8536..9213)
DNA (678bp) protein (226aa)
Cytochrome c oxidase subunit II n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZZ7_9BACT
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:EDY20311.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cyoA; Heme/copper-type cytochrome oxidase, subunit 2
13_2_20cm_scaffold_2571_12
unknown

Not on your lists

comp(9206..9466)
DNA (261bp) protein (87aa)

This feature has no annotations

13_2_20cm_scaffold_2571_13
GWA2_OP3_50_21_curated, Omnitrophica, Bacteria

Not on your lists

comp(9463..9672)
DNA (210bp) protein (70aa)
hypothetical protein Tax=GWA2_OP3_50_21_curated
13_2_20cm_scaffold_2571_14
Verrucomicrobium spinosum, Verrucomicrobium, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9673..10017)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174490E
caa(3)-type oxidase subunit IV
13_2_20cm_scaffold_2571_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10021..10935)
DNA (915bp) protein (305aa)
heme transporter CcmC n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000377BD7D
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:EEF57106.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sou
cyoC; Heme/copper-type cytochrome oxidase, subunit 3
13_2_20cm_scaffold_2571_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10889..12772)
DNA (1884bp) protein (628aa)
Cytochrome-c oxidase {ECO:0000313|EMBL:EEF57105.1}; EC=1.9.3.1 {ECO:0000313|EMBL:EEF57105.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia su
Cytochrome-c oxidase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XST8_9BACT rbh
cyoB; Heme/copper-type cytochrome oxidase, subunit 1
13_2_20cm_scaffold_2571_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12954..13637)
DNA (684bp) protein (228aa)
Phosphoglycerate mutase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0G1_9BACT
Phosphoglycerate mutase {ECO:0000313|EMBL:EDY19823.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Phosphoglycerate mutase
13_2_20cm_scaffold_2571_18
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

13733..14689
DNA (957bp) protein (319aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=583355 species="Bacteria; Verrucomicrobia; Op
DNA polymerase IV n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EJC6_CORAD
DNA-directed DNA polymerase
Displaying 18 items

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