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13_2_20cm_scaffold_270

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_270_1
CG_Proteo_01, Proteobacteria, Bacteria

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comp(2..568)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000361AA63
hypothetical protein Tax=CG_Proteo_01
hypothetical protein
13_2_20cm_scaffold_270_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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634..2226
DNA (1593bp) protein (531aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EDY16994.1}; EC=1.1.1.95 {ECO:0000313|EMBL:EDY16994.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source=
D-3-phosphoglycerate dehydrogenase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D991_9BACT rbh
serA; D-3-phosphoglycerate dehydrogenase
13_2_20cm_scaffold_270_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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2309..2569
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037924B3
transglycosylase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_2_20cm_scaffold_270_4
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2695..3645
DNA (951bp) protein (317aa)
hypothetical protein GobsU_12882 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4DDE id=5223865 bin=16ft_combo_ws3_JS1 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ62520.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
13_2_20cm_scaffold_270_5
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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3652..4887
DNA (1236bp) protein (412aa)
Ferritin-like domain fused to DUF125 family domain n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3E0V5_METI4 rbh
Ferritin-like domain fused to DUF125 family domain
Ferritin-like domain fused to DUF125 family domain {ECO:0000313|EMBL:ACD84432.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilace
13_2_20cm_scaffold_270_6
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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5180..6526
DNA (1347bp) protein (449aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXY5_OPITP
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
two component, sigma54 specific, Fis family transcriptional regulator
13_2_20cm_scaffold_270_7
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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6586..7920
DNA (1335bp) protein (445aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="
Multi-sensor signal transduction histidine kinase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXY3_OPITP
multi-sensor signal transduction histidine kinase
13_2_20cm_scaffold_270_8
unknown

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8225..8503
DNA (279bp) protein (93aa)

This feature has no annotations

13_2_20cm_scaffold_270_9
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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8582..9835
DNA (1254bp) protein (418aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXY2_OPITP
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACB75184.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Op
13_2_20cm_scaffold_270_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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9864..10562
DNA (699bp) protein (233aa)
ABC transporter related n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXY1_OPITP
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ABC transporter-like protein
13_2_20cm_scaffold_270_11
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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10581..13034
DNA (2454bp) protein (818aa)
Gll1201 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLC5_GLOVI
hypothetical protein
Gll1201 protein {ECO:0000313|EMBL:BAC89142.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_2_20cm_scaffold_270_12
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

13036..15456
DNA (2421bp) protein (807aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037EDD11
hypothetical protein
Gll1201 protein {ECO:0000313|EMBL:BAC89142.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_2_20cm_scaffold_270_13
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

15477..17897
DNA (2421bp) protein (807aa)
Permease n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYP2_OPITP rbh
permease
Permease {ECO:0000313|EMBL:ACB75278.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
13_2_20cm_scaffold_270_14
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

17899..18522
DNA (624bp) protein (208aa)
Permease n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRX4_OPITP
permease
Permease {ECO:0000313|EMBL:ACB74653.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Displaying 14 items

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