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13_2_20cm_scaffold_3559

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3559_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3..1559)
-----------------
DNA (1557bp)
protein (519aa)
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:EDY18992.1}; EC=1.8.1.9 {ECO:0000313|EMBL:EDY18992.1};; TaxID=497964 species="Bacteria; Verruc
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D412_9BACT
thioredoxin reductase
13_2_20cm_scaffold_3559_2
unknown

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comp(1570..1791)
-----------------
DNA (222bp)
protein (74aa)

This feature has no annotations

13_2_20cm_scaffold_3559_3
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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1792..2391
-----------------
DNA (600bp)
protein (200aa)
Putative uncharacterized protein Tax=RBG_16_Acidobacteria_68_9_curated
13_2_20cm_scaffold_3559_4
unknown

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2575..2769
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

13_2_20cm_scaffold_3559_5
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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3029..3712
-----------------
DNA (684bp)
protein (228aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ22_9BACT
DNA-directed RNA polymerase subunit sigma24 Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
hypothetical protein
13_2_20cm_scaffold_3559_6
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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3726..6038
-----------------
DNA (2313bp)
protein (771aa)
TPR repeat-containing serine/threonin protein kinase id=24431878 bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
TPR repeat-containing serine/threonin protein kinase Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
protein kinase
13_2_20cm_scaffold_3559_7

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6025..6522
-----------------
DNA (498bp)
protein (166aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F34B69
hypothetical protein
Tetratricopeptide repeat {ECO:0000313|EMBL:AIA10985.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_2_20cm_scaffold_3559_8
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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6691..7089
-----------------
DNA (399bp)
protein (133aa)
Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQM0_SYNAS
cytoplasmic protein
Hypothetical cytosolic protein {ECO:0000313|EMBL:ABC76374.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus a
13_2_20cm_scaffold_3559_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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7280..7717
-----------------
DNA (438bp)
protein (146aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFR1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDM65878.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_2_20cm_scaffold_3559_10
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7859..8371
-----------------
DNA (513bp)
protein (171aa)
UPI0003CFA41C related cluster n=1 Tax=unknown RepID=UPI0003CFA41C
Uncharacterized protein {ECO:0000313|EMBL:ESZ61961.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
13_2_20cm_scaffold_3559_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8516..9070
-----------------
DNA (555bp)
protein (185aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD80_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40457.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_2_20cm_scaffold_3559_12
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

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9067..9234
-----------------
DNA (168bp)
protein (56aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RY56_SYNP3
Uncharacterized protein {ECO:0000313|EMBL:KFD41698.1}; TaxID=1487582 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
hypothetical protein
13_2_20cm_scaffold_3559_13
unknown

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9521..9925
-----------------
DNA (405bp)
protein (135aa)

This feature has no annotations

13_2_20cm_scaffold_3559_14
unknown

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9929..10264
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

13_2_20cm_scaffold_3559_15
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

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10387..10752
-----------------
DNA (366bp)
protein (122aa)
Putative uncharacterized protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GXH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJS50629.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
13_2_20cm_scaffold_3559_16
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10715..11581
-----------------
DNA (867bp)
protein (289aa)
Putative uncharacterized protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GXH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJS50629.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
hypothetical protein
13_2_20cm_scaffold_3559_17
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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comp(11989..12342)
-----------------
DNA (354bp)
protein (118aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GNF6_CUPNN
hypothetical protein; K09008 hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
hypothetical protein
13_2_20cm_scaffold_3559_18
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12505..12897
-----------------
DNA (393bp)
protein (131aa)
extradiol dioxygenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51A8
Extradiol dioxygenase {ECO:0000313|EMBL:KIL37343.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
glyoxalase/bleomycin resistance protein/dioxygenase
13_2_20cm_scaffold_3559_19
unknown

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13687..14019
-----------------
DNA (333bp)
protein (111aa)

This feature has no annotations

Displaying 19 items

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