ggKbase home page

13_2_20cm_scaffold_3889

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3889_1
bacterium UASB14, Bacteria

Not on your lists

1..474
DNA (474bp) protein (158aa)
ABC transporter, substrate-binding protein, aliphatic sulfonates family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV69_9RHIZ
Putative substrate-binding protein of aliphatic sulfonate ABC transporter {ECO:0000313|EMBL:GAK51837.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
putative substrate-binding protein of aliphatic sulfonate ABC transporter
13_2_20cm_scaffold_3889_2
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

474..1307
DNA (834bp) protein (278aa)
sugar ABC transporter ATPase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745D6C
ssuB; ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
ssuB; putative ATP-binding component of ABC transporters
13_2_20cm_scaffold_3889_3
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1304..2071
DNA (768bp) protein (256aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV67_9RHIZ
ssuC; integral membrane components of the ABC transporters; K02050 NitT/TauT family transport system permease protein Tax=GWF2_Verrucomicrobia_62_7_curated
ABC transporter permease
13_2_20cm_scaffold_3889_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

2068..2370
DNA (303bp) protein (101aa)
Phosphotransferase system, phosphocarrier protein HPr n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBN5_9BACT
Phosphotransferase system, phosphocarrier protein HPr {ECO:0000313|EMBL:EDY16137.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus El
phosphotransferase system, phosphocarrier protein HPr
13_2_20cm_scaffold_3889_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(2367..3254)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5V0_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY18153.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_scaffold_3889_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

3410..4369
DNA (960bp) protein (320aa)
Beta-lactamase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0W7_9BACT
Beta-lactamase domain protein {ECO:0000313|EMBL:EDY19979.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Zn-dependent hydrolase of the beta-lactamase fold
13_2_20cm_scaffold_3889_7
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

4366..4881
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN35309.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="
Uncharacterized protein id=2209368 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
13_2_20cm_scaffold_3889_8
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4949..7123
DNA (2175bp) protein (725aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000360B2E8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA15494.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
13_2_20cm_scaffold_3889_9
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(7176..7715)
DNA (540bp) protein (180aa)
Stf0 sulfotransferase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CR34_TRURR
Stf0 sulfotransferase
Stf0 sulfotransferase {ECO:0000313|EMBL:ADI13434.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM
13_2_20cm_scaffold_3889_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8055..9278)
DNA (1224bp) protein (408aa)
Catalytic domain of component of various dehydrogenase complexes n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRZ8_9BACT
Catalytic domain of component of various dehydrogenase complexes {ECO:0000313|EMBL:EEF57369.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia s
catalytic domain of components of various dehydrogenase complexes
13_2_20cm_scaffold_3889_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9284..10252)
DNA (969bp) protein (323aa)
Transketolase central region n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRZ9_9BACT
Transketolase central region {ECO:0000313|EMBL:EEF57370.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source=
transketolase
13_2_20cm_scaffold_3889_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10249..11283)
DNA (1035bp) protein (345aa)
Dehydrogenase E1 component n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC32_9BACT
Dehydrogenase E1 component {ECO:0000313|EMBL:EDY16006.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
dehydrogenase E1 component
13_2_20cm_scaffold_3889_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(11409..12134)
DNA (726bp) protein (242aa)
Chromosome partition protein Smc n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D705_9BACT
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
chromosome segregation protein SMC
Displaying 13 items

View Taxonomy