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13_2_20cm_scaffold_407

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_407_1
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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216..1616
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017458E1 rbh
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
hypothetical protein
13_2_20cm_scaffold_407_2
RLO_PLX_64_10, Bacteria

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comp(1619..2032)
DNA (414bp) protein (138aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=2 Tax=unclassified Opitutaceae RepID=H1J002_9BACT
glyoxalase
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
13_2_20cm_scaffold_407_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2040..2477)
DNA (438bp) protein (146aa)
Iron (Metal) dependent repressor, DtxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTL8_9BACT
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:EDY21892.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;
transcriptional regulator
13_2_20cm_scaffold_407_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2636..4039
DNA (1404bp) protein (468aa)
Divalent metal cation transporter MntH n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTL7_9BACT
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Manganese transport protein mntH
13_2_20cm_scaffold_407_5
unknown

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4055..4258
DNA (204bp) protein (68aa)

This feature has no annotations

13_2_20cm_scaffold_407_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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4251..4676
DNA (426bp) protein (142aa)
UspA domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
UspA domain-containing protein
UspA domain protein id=4622027 bin=GWC2_OP3-like_45_7 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
13_2_20cm_scaffold_407_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

4828..6066
DNA (1239bp) protein (413aa)
Glycogen synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVZ8_9BACT
Glycogen synthase {ECO:0000313|EMBL:EDY21590.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
predicted glycogen synthase, ADP-glucose transglucosylase
13_2_20cm_scaffold_407_8
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6102..6977)
DNA (876bp) protein (292aa)
Uncharacterized protein n=3 Tax=Xanthomonas oryzae pv. oryzae RepID=Q5GZ87_XANOR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW75984.1}; TaxID=291331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae
13_2_20cm_scaffold_407_9
Rheinheimera sp. A13L, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7002..7808)
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Rheinheimera sp. A13L RepID=F7NUF3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGM78413.1}; TaxID=506534 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera sp. A13L.;
GumN family protein
13_2_20cm_scaffold_407_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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8051..9247
DNA (1197bp) protein (399aa)
Cell wall hydrolase/autolysin n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXU6_9BACT
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:EDY21094.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin42
amiC; N-acetylmuramoyl-L-alanine amidase
13_2_20cm_scaffold_407_11
unknown

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9255..9821
DNA (567bp) protein (189aa)

This feature has no annotations

13_2_20cm_scaffold_407_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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10185..12227
DNA (2043bp) protein (681aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi
Phosphomethylpyrimidine synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIU5_9BACT
thiamine biosynthesis protein ThiC
13_2_20cm_scaffold_407_13
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12239..12457
DNA (219bp) protein (73aa)
Phosphomethylpyrimidine synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D313_9BACT
thiamine biosynthesis protein ThiC
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
13_2_20cm_scaffold_407_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(12575..14026)
DNA (1452bp) protein (484aa)
Peptidase M24 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9X6_9BACT
peptidase M24 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
peptidase M24
13_2_20cm_scaffold_407_15

Not on your lists

comp(14130..15674)
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F34B69
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49069.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Displaying 15 items

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