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13_2_20cm_scaffold_429

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_429_1
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46..282)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2GL69_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL23383.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. A
hypothetical protein
13_2_20cm_scaffold_429_2
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(260..670)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DAT7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU81313.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG
glutathione-dependent formaldehyde-activating protein
13_2_20cm_scaffold_429_3
unknown

Not on your lists

comp(709..1659)
DNA (951bp) protein (317aa)

This feature has no annotations

13_2_20cm_scaffold_429_4
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1895..2884
DNA (990bp) protein (330aa)
amino acid transporter n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B54BD9
amino acid permease Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
amino acid permease
13_2_20cm_scaffold_429_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2844..3368
DNA (525bp) protein (175aa)
Amino acid permease-associated region n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029N7_SOLUE
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) {ECO:0000313|EMBL:CDM65482.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" sour
amino acid permease
13_2_20cm_scaffold_429_6
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

3430..4938
DNA (1509bp) protein (503aa)
amino acid-transporting permease; K03294 basic amino acid/polyamine antiporter, APA family Tax=CG_Bacteroid_01
Amino acid transport protein id=4128414 bin=GWF2_Bacteroidetes_38_335 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
amino acid permease
13_2_20cm_scaffold_429_7
unknown

Not on your lists

comp(4971..5717)
DNA (747bp) protein (249aa)

This feature has no annotations

13_2_20cm_scaffold_429_8
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5873..6358
DNA (486bp) protein (162aa)
D-alpha,beta-D-heptose 7-phosphate 1-kinase (EC:2.7.1.- 2.7.7.-) Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI000361AB91
rfaE bifunctional protein
13_2_20cm_scaffold_429_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

6418..7014
DNA (597bp) protein (199aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU39_9BACT
phosphoribosylglycinamide formyltransferase
13_2_20cm_scaffold_429_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7062..8063)
DNA (1002bp) protein (334aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2N3_9BACT
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein
13_2_20cm_scaffold_429_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8060..8686)
DNA (627bp) protein (209aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR53_9BACT
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:000025
glycerol-3-phosphate acyltransferase
13_2_20cm_scaffold_429_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(8693..10594)
DNA (1902bp) protein (634aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBR5_9BACT rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=497964 species="Bacter
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
13_2_20cm_scaffold_429_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10602..11372)
DNA (771bp) protein (257aa)
SNARE associated Golgi protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBI0_9BACT
SNARE associated Golgi protein {ECO:0000313|EMBL:EDY16167.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin4
hypothetical protein
13_2_20cm_scaffold_429_14
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11453..12376)
DNA (924bp) protein (308aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadal
Methylenetetrahydrofolate reductase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A3T2_PELCD
metF-1; 5,10-methylenetetrahydrofolate reductase
13_2_20cm_scaffold_429_15
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12485..13414)
DNA (930bp) protein (310aa)
Cyclase family protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U8K9_CYAP2 rbh
cyclase family protein
Cyclase family protein {ECO:0000313|EMBL:ADN13755.1}; Flags: Precursor;; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (stra
13_2_20cm_scaffold_429_16
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13801..14253
DNA (453bp) protein (151aa)
Methyltransferase type 11 n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WZF9_ACISM
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ADW68847.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain AT
13_2_20cm_scaffold_429_17
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14272..15063
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZFH4_TERRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL87992.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 /
13_2_20cm_scaffold_429_18
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15144..16265
DNA (1122bp) protein (374aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZKI1_TERRK rbh
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AFL89749.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (str
13_2_20cm_scaffold_429_19
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

16262..17284
DNA (1023bp) protein (341aa)
CBS domain containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XG75_9BACT
CBS domain containing protein {ECO:0000313|EMBL:EEF61237.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source
CBS domain containing protein
13_2_20cm_scaffold_429_20
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17281..17967
DNA (687bp) protein (229aa)
glycosyl transferase n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00038230A4
glycosyl transferase family protein
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACA19230.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylob
13_2_20cm_scaffold_429_21
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18022..18660
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INZ2_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI99412.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillu
13_2_20cm_scaffold_429_22
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18821..19927
DNA (1107bp) protein (369aa)
putative lipopolysaccharide heptosyltransferase II (EC:2.4.-.-)
lipopolysaccharide heptosyltransferase II Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Lipopolysaccharide heptosyltransferase I id=2520370 bin=GWC2_Syntrophobacterales_56_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_2_20cm_scaffold_429_23
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20028..20516
DNA (489bp) protein (163aa)
Putative acetyltransferase n=1 Tax=Serratia fonticola AU-P3(3) RepID=U2LPT0_SERFO
Uncharacterized protein {ECO:0000313|EMBL:KFN46540.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli
GCN5 family acetyltransferase
13_2_20cm_scaffold_429_24

Not on your lists

20623..22173
DNA (1551bp) protein (517aa)
Oxidoreductase molybdopterin binding protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEZ6_THET1
Oxidoreductase molybdopterin binding domain protein {ECO:0000313|EMBL:AIA12722.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
oxidoreductase molybdopterin binding protein
13_2_20cm_scaffold_429_25
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

22272..23201
DNA (930bp) protein (310aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;
Thioredoxin reductase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8X6_9BACT
thioredoxin reductase
13_2_20cm_scaffold_429_26
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

23379..24509
DNA (1131bp) protein (377aa)
Glycosyl transferase group 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D879_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EDY17272.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rfaG; glycosyltransferase
13_2_20cm_scaffold_429_27
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

24506..25201
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D881_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17274.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
wecD; Acetyltransferase, GNAT family
13_2_20cm_scaffold_429_28
unknown

Not on your lists

26009..26224
DNA (216bp) protein (72aa)

This feature has no annotations

13_2_20cm_scaffold_429_29

Not on your lists

comp(26237..29188)
DNA (2952bp) protein (984aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000370FAB7
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48717.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Mo-co oxidoreductase dimerization domain-containing protein
Displaying 29 items

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