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13_2_20cm_scaffold_455

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_455_1

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comp(3..1313)
DNA (1311bp) protein (437aa)
predicted hydrolase of metallo-beta-lactamase fold protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744361
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49252.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
DNA internalization-related competence protein ComEC/Rec2
13_2_20cm_scaffold_455_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1559..2812
DNA (1254bp) protein (418aa)
AAA ATPase central domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XID4_9BACT
AAA ATPase central domain protein {ECO:0000313|EMBL:EEF60395.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" so
ATPase AAA
13_2_20cm_scaffold_455_3
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2919..3785
DNA (867bp) protein (289aa)
ubiA; prenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZWU7_9BACT
4-hydroxybenzoate polyprenyltransferase
13_2_20cm_scaffold_455_4
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3885..4316)
DNA (432bp) protein (144aa)
Sugar-phosphate isomerase, RpiB/LacA/LacB family {ECO:0000313|EMBL:CCH54341.1}; EC=5.3.1.6 {ECO:0000313|EMBL:CCH54341.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyt
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GKB6_9BACT
ribose 5-phosphate isomerase
13_2_20cm_scaffold_455_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4434..5387)
DNA (954bp) protein (318aa)
Chaperone protein DnaJ n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFY3_9BACT
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivis
chaperone DnaJ domain-containing protein
13_2_20cm_scaffold_455_6
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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5736..6368
DNA (633bp) protein (211aa)
uracil-DNA glycosylase superfamily protein; K03648 uracil-DNA glycosylase [EC:3.2.2.27] Tax=GWF2_WOR_2_43_52_curated
Uracil-DNA glycosylase superfamily id=2883685 bin=GWF2_OP3_43_52 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
uracil-DNA glycosylase superfamily protein
13_2_20cm_scaffold_455_7
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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6688..7839
DNA (1152bp) protein (384aa)
Sulfatase id=3708237 bin=GWF2_Lentisphaerae_49_21 species=Paenibacillus sp. genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
sulfatase Tax=GWF2_Lentisphaerae_49_21_curated
arylsulfatase A family protein
13_2_20cm_scaffold_455_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7965..8567)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036FCF75
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN96937.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium
13_2_20cm_scaffold_455_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8630..10024)
DNA (1395bp) protein (465aa)
56kDa selenium binding protein (SBP56) n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZ77_9BACT rbh
Selenium-binding protein 1 {ECO:0000313|EMBL:ETX06669.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
56kDa selenium binding protein (SBP56)
13_2_20cm_scaffold_455_10
Alteromonas australica, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10160..10894)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NY80_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF99657.1}; TaxID=589873 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas austra
13_2_20cm_scaffold_455_11
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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10954..11565
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) RepID=Q3JBR5_NITOC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA57731.1}; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani (
13_2_20cm_scaffold_455_12
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(11569..12306)
DNA (738bp) protein (246aa)
Genome sequencing data, contig C323 n=1 Tax=Microcystis aeruginosa PCC 9808 RepID=I4HVZ9_MICAE
Uncharacterized protein {ECO:0000313|EMBL:GAL93403.1}; TaxID=449439 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa NIES-44.;"
13_2_20cm_scaffold_455_13
Leptolyngbya sp. PCC 7376, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(12290..12958)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00036DAC80
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY36736.1}; TaxID=111781 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7376.;"
13_2_20cm_scaffold_455_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(13180..13881)
DNA (702bp) protein (234aa)
REG-2-like, HAD superfamily (Subfamily IA) hydrolase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ0_9BACT
REG-2-like, HAD superfamily (Subfamily IA) hydrolase {ECO:0000313|EMBL:EDY20591.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ell
haloacid dehalogenase
13_2_20cm_scaffold_455_15
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

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14006..14671
DNA (666bp) protein (222aa)
hemolysin III family channel protein; K11068 hemolysin III id=14624112 bin=bin5_DeltaP species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
hemolysin III family channel protein; K11068 hemolysin III Tax=CSP1_8_Deltaproteobacteria
hemolysin-3
13_2_20cm_scaffold_455_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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14751..15068
DNA (318bp) protein (106aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZL8_9BACT
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:EDY20182.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428
transcriptional regulator, AsnC family
Displaying 16 items

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