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13_2_20cm_scaffold_579

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_579_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1..453)
DNA (453bp) protein (151aa)
Biotin/lipoate A/B protein ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYR1_9BACT
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EDY20602.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
lplA; lipoate-protein ligase A
13_2_20cm_scaffold_579_2

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comp(453..1184)
DNA (732bp) protein (244aa)
Orotidine-5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=16879713 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Uncharacterized protein {ECO:0000313|EMBL:KKN64595.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_2_20cm_scaffold_579_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1262..2095
DNA (834bp) protein (278aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1Y4_9BACT
13_2_20cm_scaffold_579_4
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2097..4370)
DNA (2274bp) protein (758aa)
excinuclease ABC subunit B n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744499
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B
13_2_20cm_scaffold_579_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4421..5593)
DNA (1173bp) protein (391aa)
Putative dipeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A990_GEMAT rbh
putative dipeptidase
Putative dipeptidase {ECO:0000313|EMBL:BAH39067.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27
13_2_20cm_scaffold_579_6

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5899..8298
DNA (2400bp) protein (800aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NM4_SOLUE
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49190.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_2_20cm_scaffold_579_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8423..10102
DNA (1680bp) protein (560aa)
serine/threonin protein kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
TPR repeat-containing serine/threonin protein kinase id=24525567 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
13_2_20cm_scaffold_579_8
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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comp(10103..10975)
DNA (873bp) protein (291aa)
Peptidase M50 id=3806613 bin=GWF2_Lentisphaerae_49_21 species=Clostridium beijerinckii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good + rbh
peptidase M50 Tax=GWF2_Lentisphaerae_49_21_curated
peptidase M50
13_2_20cm_scaffold_579_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(11168..12751)
DNA (1584bp) protein (528aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D456_9BACT
Carbohydrate kinase, YjeF related protein {ECO:0000313|EMBL:EDY18657.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
carbohydrate kinase
13_2_20cm_scaffold_579_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(12752..13585)
DNA (834bp) protein (278aa)
Cell wall hydrolase/autolysin n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D457_9BACT
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:EDY18658.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
N-acetylmuramoyl-L-alanine amidase
13_2_20cm_scaffold_579_11
unknown

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comp(13585..13731)
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 11 items

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