ggKbase home page

13_2_20cm_scaffold_92

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_92_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1..546)
DNA (546bp) protein (182aa)
PHP domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0I8_9BACT
PHP domain protein {ECO:0000313|EMBL:EDY19850.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Metal-dependent phosphoesterase (PHP family)
13_2_20cm_scaffold_92_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(668..2545)
DNA (1878bp) protein (626aa)
ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R6_9BACT rbh
ABC transporter-related protein {ECO:0000313|EMBL:EDY17124.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin
msbA; putative lipid A export ATP-binding/permease protein MsbA
13_2_20cm_scaffold_92_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(2542..3558)
DNA (1017bp) protein (339aa)
lipopolysaccharide heptosyltransferase III, putative n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017458EE
Glycosyl transferase family 9 {ECO:0000313|EMBL:EDY17123.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
lipopolysaccharide glucosyltransferase
13_2_20cm_scaffold_92_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3610..4833)
DNA (1224bp) protein (408aa)
Glycosyl transferase group 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWW8_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EDY21288.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glycosyltransferase
13_2_20cm_scaffold_92_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

5025..6158
DNA (1134bp) protein (378aa)
Glycosyl transferase group 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R4_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EDY17122.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glucuronic acid transferase WabG
13_2_20cm_scaffold_92_6
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6139..6723)
DNA (585bp) protein (195aa)
Isoprenylcysteine carboxyl methyltransferase family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F1S5_ACIC5
isoprenylcysteine carboxyl methyltransferase family protein
Isoprenylcysteine carboxyl methyltransferase family protein {ECO:0000313|EMBL:ACO33473.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source=
13_2_20cm_scaffold_92_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6781..7134)
DNA (354bp) protein (118aa)
Anti-sigma factor antagonist n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8T7_9BACT
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
anti-sigma-factor antagonist
13_2_20cm_scaffold_92_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7157..7879)
DNA (723bp) protein (241aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0I4_9BACT
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:EDY19846.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.
hydrolase
13_2_20cm_scaffold_92_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7912..8403)
DNA (492bp) protein (164aa)
FHA domain containing protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVG0_9BACT
FHA domain containing protein {ECO:0000313|EMBL:EDY21402.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
FHA domain-containing protein
13_2_20cm_scaffold_92_10

Not on your lists

8578..8871
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Ralstonia solanacearum RepID=Q8Y348_RALSO
Marine sediment metagenome DNA, contig: S12H4_L01038 {ECO:0000313|EMBL:GAI83737.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_2_20cm_scaffold_92_11
unknown

Not on your lists

comp(9104..9316)
DNA (213bp) protein (71aa)

This feature has no annotations

13_2_20cm_scaffold_92_12
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

9777..11573
DNA (1797bp) protein (599aa)
Elongation factor 4 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZN7_9BACT
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
GTP-binding protein LepA
13_2_20cm_scaffold_92_13
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

11690..12781
DNA (1092bp) protein (364aa)
lepB; Signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Signal peptidase I n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JXV1_9BACT
lepB; Signal peptidase I
13_2_20cm_scaffold_92_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

12882..14060
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D167_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20079.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_2_20cm_scaffold_92_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14086..14934
DNA (849bp) protein (283aa)
Squalene/phytoene synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D169_9BACT
Squalene/phytoene synthase {ECO:0000313|EMBL:EDY20081.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
erg9; Phytoene/squalene synthetase fused to flavin containing amine oxidoreductase
13_2_20cm_scaffold_92_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15383..15772
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D170_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20082.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_scaffold_92_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(15792..17258)
DNA (1467bp) protein (489aa)
UbiD family decarboxylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D171_9BACT rbh
UbiD family decarboxylase {ECO:0000313|EMBL:EDY20083.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ubiD; 3-polyprenyl-4-hydroxybenzoate decarboxylase
13_2_20cm_scaffold_92_18

Not on your lists

comp(17315..17746)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744BA8
Marine sediment metagenome DNA, contig: S01H1_S31404 {ECO:0000313|EMBL:GAG40446.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_2_20cm_scaffold_92_19
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

17915..18835
DNA (921bp) protein (307aa)
Cyclic pyranopterin phosphate synthase {ECO:0000256|SAAS:SAAS00064088}; EC=4.1.99.18 {ECO:0000256|SAAS:SAAS00064088};; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;"
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744BA9
hypothetical protein
13_2_20cm_scaffold_92_20
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

18957..19421
DNA (465bp) protein (155aa)
molybdenum cofactor biosynthesis protein MoaC n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017468B0
Molybdenum cofactor biosynthesis protein C {ECO:0000313|EMBL:EEF61050.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
molybdenum cofactor biosynthesis protein c
13_2_20cm_scaffold_92_21
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

19426..21009
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L6T0_9BACT
hypothetical protein; K12600 superkiller protein 3 Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
hypothetical protein
13_2_20cm_scaffold_92_22
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

21024..21515
DNA (492bp) protein (164aa)
molybdenum cofactor biosynthesis protein Mog n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017468B1
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:EEF61051.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosp
molybdenum cofactor synthesis protein
13_2_20cm_scaffold_92_23
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(21600..22643)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174502B rbh
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ACD04303.1}; Flags: Precursor;; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermans
13_2_20cm_scaffold_92_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(22681..23244)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ10_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20701.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_2_20cm_scaffold_92_25
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

23249..23752
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ11_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20702.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_2_20cm_scaffold_92_26
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

23877..24632
DNA (756bp) protein (252aa)
his2; Histidinol phosphatase, PHP family; K04486 histidinol-phosphatase (PHP family) [EC:3.1.3.15] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036221B2
his2; Histidinol phosphatase, PHP family
13_2_20cm_scaffold_92_27
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(24627..25505)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D330_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19141.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_scaffold_92_28
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

25643..26905
DNA (1263bp) protein (421aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4J4_9BACT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EDY18447.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavu
nrfG; TPR repeats containing protein
13_2_20cm_scaffold_92_29
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

26902..27405
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4J3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18446.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_scaffold_92_30
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

27412..28290
DNA (879bp) protein (293aa)
Tfp pilus assembly protein PilF n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJX2_CHLTF
Tfp pilus assembly protein PilF
Tfp pilus assembly protein PilF {ECO:0000313|EMBL:AEP13139.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophil
Displaying items 1-30 of 39 in total

View Taxonomy