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13_2_20cm_scaffold_17_30

Organism: 13_2_20CM_Verrucomicrobia_54_12

near complete RP 47 / 55 BSCG 45 / 51 ASCG 11 / 38
Location: comp(32024..34051)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD19_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 38.2
  • Coverage: 468.0
  • Bit_score: 273
  • Evalue 6.90e-70
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EEF62365.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera similarity UNIPROT
DB: UniProtKB
  • Identity: 38.2
  • Coverage: 468.0
  • Bit_score: 273
  • Evalue 9.60e-70
lipopolysaccharide biosynthesis protein GumC similarity KEGG
DB: KEGG
  • Identity: 25.4
  • Coverage: 492.0
  • Bit_score: 108
  • Evalue 6.30e-21

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2028
ATGGCTGAAATACGACGCGAAACACAACATCCCTCCGGAATGAAGCTGGGCGACATTCTTTTCGCTCTCTTCAAACGCAAGCGAACCATCATCGTGTGCGCAGTGGTGGGCATTATTGCCGCTGCGGCGGTTTATTTTCTCTTTCCGCCTTCCTACGAATCACAGGCCAAATTGTTGGTGCGCTACGTTCTGGAAAGGAGCGGAGTCGACCCAGCCGAGGCAGCGGGAGCCGCGGCTCAATCGGGCAACCAAGCGCAAGCGGATAGGGTGATCGGGGCCGAAACTGAGATTCTGACCAGTTGGGATCTGGCCATACAAGTTGCCGAGGCACTCGGTCCCCAGCGATTGCTTCCACCGCCCCAAGACTTGTTTAGTCACGTCGTCCAGGCAGTCGGACTCAAACGGTTACTGCCGTCCTCTGGACCATCGGCAACAGTGGCCGAGGCGGCTGGCAGTATTGCTTCAGGTCTGAAGGTAGTTTCAGACAAAGGAAGCAACATCATCTTAATTTCGTATAAGAACCGTAATCAGGAGATCGCACCGCTCGTTTTGCAGGAACTGTTGAGTCGTTATTTCGTCAAGCATCTTGAAGTGCACCGTTCCGCCGGCGCTTTCGATTTTGTGGCTCAACAGACCGATCAGGTCCGAGCGCGCTTGAATCAGGCCGAAGACGCGCTCAAATCGTTGAGAGAGAAAACAGGAATTGCGTCGCTCAAAGAGGGCTCAGCGGCCATTACCACCGAGGCGGCGAAAGCCCAGGAACAACTTAACGCCGCCGAGGCGGACCTGGCCGAACAACAAGCTCTTGTTAATCAGATCGTAGAAAAAAAGACAAAAGGGTGGAGAACAAAGACCTCGTCACCTGAAAACAGCCCAAAATCTGTAAAGGCCAAGGTCGCTGGCACCCAGGCAAAAATCGAGACACTTAAGGCCCGGCTTAGCGATATTCAGCGGAGGACGAAACAGCTTTCGGAGCTCGCTCCGCAAATTGAAGATTTGGAACGGAAGAAGGAGATGGACGAAGCGAATTACAAGTACTTCGCGGCATCCCTCGAAAAGGCACGGATCGACGAGGCCTTGGACCCTACCAAGATGCCTAATATTAGCGCGGTCCAGCGGCCCTCTCCTCCTGGTCTGGAGACTAAAAAACGCGATAAGCTCGCACTCGCGTTAGTTGGTGGGGGAGTGGCCTTCGGGATAGTGCTCGCGCTGCTAAGGGGCTTGGTTTTGAACCAGACCGTTGGCCGGCCGCTCCAGCTGGAAACACAGTTACACATTCCATTGATGCTCTCTATTCCATATAGGAACGGTCACTTCGCCTTGCCTCGTAATGGTTCACCGGCGAATCCGGGAGCGCTTACCACAGGGCGGCGTCGCGCCAAATTGGCGCCGTGGGACGCCGATCACTTCATCCGGCCATACTGCGATGCGATCCGTGATCGTCTCGGTCTTTATTTCGAGCTCAATCACTTGACGCATAAACCGAAGCTGGTGGGCGTCACCAGCGTTTCGGAGGAAGGGGGAACTTCCACCCTTGCTGCTGGGCTGGCTGCGTCACTTTCAGAAACAAACGACGGCAAGGTGCTCCTCGTCGATGTGAATTTGGGACCGGAGGAGGTGCATCCGTTTTTCAAGGGTAAACCTGCTTACCCTCTAAACAAAGCTCTTAAGCCATCTGACTCCATCGCCTCGGCTGCGGACAATCTCTATCTCGCCACAGTGGGTTCGCCTAGTACCGGCGGTCCGGCTCAGCTCGGCTTGAAAAAATTCTTCGACATGATGCCAAATATGAAGGCGAGCGACTTTGACTACATTATTTTTGACATGCCCCCGCTGGATCAAACGAGTCCCACGTGGGGAATGGCTGCCTTCATGGACAAGCTTTTGCTTGTGGTCGAGGCAGAGAAGAACAACCGTGAGGGCATTAAGCGCAGCTACGGCAAGCTGATCGCTGAGCGAAACAATGTTGCAGTCTTGGTAAACAAGTCGCGTTCTTACGTGCCGAAGTGGCTTGATTCCGAGTCTTAA
PROTEIN sequence
Length: 676
MAEIRRETQHPSGMKLGDILFALFKRKRTIIVCAVVGIIAAAAVYFLFPPSYESQAKLLVRYVLERSGVDPAEAAGAAAQSGNQAQADRVIGAETEILTSWDLAIQVAEALGPQRLLPPPQDLFSHVVQAVGLKRLLPSSGPSATVAEAAGSIASGLKVVSDKGSNIILISYKNRNQEIAPLVLQELLSRYFVKHLEVHRSAGAFDFVAQQTDQVRARLNQAEDALKSLREKTGIASLKEGSAAITTEAAKAQEQLNAAEADLAEQQALVNQIVEKKTKGWRTKTSSPENSPKSVKAKVAGTQAKIETLKARLSDIQRRTKQLSELAPQIEDLERKKEMDEANYKYFAASLEKARIDEALDPTKMPNISAVQRPSPPGLETKKRDKLALALVGGGVAFGIVLALLRGLVLNQTVGRPLQLETQLHIPLMLSIPYRNGHFALPRNGSPANPGALTTGRRRAKLAPWDADHFIRPYCDAIRDRLGLYFELNHLTHKPKLVGVTSVSEEGGTSTLAAGLAASLSETNDGKVLLVDVNLGPEEVHPFFKGKPAYPLNKALKPSDSIASAADNLYLATVGSPSTGGPAQLGLKKFFDMMPNMKASDFDYIIFDMPPLDQTSPTWGMAAFMDKLLLVVEAEKNNREGIKRSYGKLIAERNNVAVLVNKSRSYVPKWLDSES*