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13_2_20cm_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_17_1
unknown

Not on your lists

79..540
DNA (462bp) protein (154aa)

This feature has no annotations

13_2_20cm_scaffold_17_2
unknown

Not on your lists

comp(577..765)
DNA (189bp) protein (63aa)

This feature has no annotations

13_2_20cm_scaffold_17_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(722..1078)
DNA (357bp) protein (119aa)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EEF62387.1}; EC=1.1.1.22 {ECO:0000313|EMBL:EEF62387.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verruco
Nucleotide sugar dehydrogenase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD41_9BACT
UDP-glucose/GDP-mannose dehydrogenase-like protein
13_2_20cm_scaffold_17_4
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(1088..1873)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002DC41B9
Cytosine deaminase {ECO:0000313|EMBL:KIF37969.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
13_2_20cm_scaffold_17_5
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2222..3835)
DNA (1614bp) protein (538aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0H124_9GAMM rbh
membrane protein
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:AGA91762.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae;
13_2_20cm_scaffold_17_6
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3900..4649)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WPA0_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ21377.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
13_2_20cm_scaffold_17_7
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(4633..5691)
DNA (1059bp) protein (353aa)
glycosyltransferase (EC:2.4.-.-); K00786 [EC:2.4.-.-] Tax=GWF2_Planctomycetes_42_9_curated
Glycosyl transferase family 2 id=3069149 bin=GWF2_Planctomycetes_42_9 species=Salinisphaera shabanensis genus=Salinisphaera taxon_order=Salinisphaerales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
family 2 glycosyl transferase
13_2_20cm_scaffold_17_8
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(5808..6788)
DNA (981bp) protein (327aa)
glycosyltransferase (EC:2.4.-.-); K00786 [EC:2.4.-.-] Tax=GWF2_Planctomycetes_42_9_curated
Glycosyl transferase family 2 id=3069149 bin=GWF2_Planctomycetes_42_9 species=Salinisphaera shabanensis genus=Salinisphaera taxon_order=Salinisphaerales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
glycosyl transferase 2 family protein
13_2_20cm_scaffold_17_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6908..7924)
DNA (1017bp) protein (339aa)
glycosyl transferase family 2 Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=1750044 bin=GWD2_Desulfuromonadales_54_10 species=Stanieria cyanosphaera genus=Stanieria taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
glycosyl transferase family 2
13_2_20cm_scaffold_17_10
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(7924..9252)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037D8E6C
glycosyl transferase, group 1
Tax=BJP_IG2103_Bacteroidetes_41_9
13_2_20cm_scaffold_17_11
GWA2_Elusimicrobia_61_42_curated, Elusimicrobia, Bacteria

Not on your lists

comp(9268..10221)
DNA (954bp) protein (318aa)
hypothetical protein; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=GWA2_Elusimicrobia_61_42_curated
Putative uncharacterized protein id=4958357 bin=GWA2_Elusi_like_61_42 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hypothetical protein
13_2_20cm_scaffold_17_12

Not on your lists

comp(10205..11107)
DNA (903bp) protein (301aa)
Sulfotransferase protein n=1 Tax=sediment metagenome RepID=D9PIR1_9ZZZZ
Sulfotransferase protein {ECO:0000313|EMBL:EFK96557.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
sulfotransferase
13_2_20cm_scaffold_17_13
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11310..13130)
DNA (1821bp) protein (607aa)
Asparagine synthase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGV9_SYNFM rbh
asparagine synthase
Asparagine synthase {ECO:0000313|EMBL:ABK16661.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophob
13_2_20cm_scaffold_17_14
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13366..14103)
DNA (738bp) protein (246aa)
Methyltransferase type 12 n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UK01_CYAP2
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ADN14637.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
13_2_20cm_scaffold_17_15
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14130..15437)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00035E8A38 rbh
glycosyl transferase group 1
Tax=BJP_IG2102_Porphyrobacter_62_18
13_2_20cm_scaffold_17_16
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15653..16639)
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGW0_SYNFM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK16662.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntro
13_2_20cm_scaffold_17_17
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

comp(16636..18579)
DNA (1944bp) protein (648aa)
asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=RIFOXYB2_FULL_RIF07_49_35_curated
asparagine synthase (EC:6.3.5.4)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00036FD125
13_2_20cm_scaffold_17_18
RBG_16_Chloroflexi_47_49_curated, Chloroflexi, Bacteria

Not on your lists

comp(18587..19447)
DNA (861bp) protein (287aa)
ubiquinone/menaquinone biosynthesis methylase-like protein Tax=RBG_16_Chloroflexi_47_49_curated
Methyltransferase type 11 id=4214126 bin=GWF2_Lentisphaerae_57_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
sam9; putative S-adenosylmethionine-dependent methyltransferase
13_2_20cm_scaffold_17_19
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

comp(19458..20741)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000379E53B
hypothetical protein Tax=RBG_13_Caldithrix_44_9_curated
hypothetical protein
13_2_20cm_scaffold_17_20
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20788..21696)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00036772E3
family 2 glycosyl transferase Tax=RBG_16_Deltaproteobacteria_64_85_curated
family glycosyltransferase
13_2_20cm_scaffold_17_21
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

comp(21725..22870)
DNA (1146bp) protein (382aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YJL2_9DELT
oxidoreductase Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
oxidoreductase
13_2_20cm_scaffold_17_22
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

comp(22917..23987)
DNA (1071bp) protein (357aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YJK9_9DELT
epimerase Tax=RBG_16_RIF03_38_10_curated
epimerase
13_2_20cm_scaffold_17_23
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

comp(24024..25454)
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037CB0E2
O-antigen polymerase Tax=RBG_16_RIF03_38_10_curated
exopolysaccharide biosynthesis lipoprotein
13_2_20cm_scaffold_17_24
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25504..26235)
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGV4_SYNFM
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
13_2_20cm_scaffold_17_25
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(26370..27530)
DNA (1161bp) protein (387aa)
Pleiotropic regulatory protein DegT n=1 Tax=Rhodopirellula europaea SH398 RepID=M5RZX1_9PLAN rbh
Pleiotropic regulatory protein DegT {ECO:0000313|EMBL:EMI24761.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodo
DegT family aminotransferase
13_2_20cm_scaffold_17_26
GWA2_Elusimicrobia_62_23_curated, Elusimicrobia, Bacteria

Not on your lists

comp(27566..28093)
DNA (528bp) protein (176aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A07546
acetyltransferase Tax=GWA2_Elusimicrobia_62_23_curated
acetyltransferase
13_2_20cm_scaffold_17_27
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28167..29411)
DNA (1245bp) protein (415aa)
Glycosyl transferase group 1 n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J0N1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJS30827.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatit
group 1 glycosyl transferase family protein
13_2_20cm_scaffold_17_28
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(29438..30745)
DNA (1308bp) protein (436aa)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CDM66241.1}; EC=1.1.1.132 {ECO:0000313|EMBL:CDM66241.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" so
nucleotide sugar dehydrogenase (EC:1.1.1.132)
GDP-mannose 6-dehydrogenase n=1 Tax=Desulfobacter curvatus RepID=UPI00036E6DDA
13_2_20cm_scaffold_17_29
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(30775..31890)
DNA (1116bp) protein (372aa)
Glycosyl transferase group 1 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD20_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EEF62366.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source=
hypothetical protein
13_2_20cm_scaffold_17_30
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(32024..34051)
DNA (2028bp) protein (676aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD19_9BACT
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EEF62365.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera
lipopolysaccharide biosynthesis protein GumC
Displaying items 1-30 of 93 in total

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