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13_2_20cm_scaffold_1844_20

Organism: 13_2_20CM_Verrucomicrobia_54_12

near complete RP 47 / 55 BSCG 45 / 51 ASCG 11 / 38
Location: 16473..17075

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 54 subunit, RpoN n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D101_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 199.0
  • Bit_score: 218
  • Evalue 6.00e-54
RNA polymerase, sigma 54 subunit, RpoN {ECO:0000313|EMBL:EDY20013.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 199.0
  • Bit_score: 218
  • Evalue 8.40e-54
RNA polymerase sigma 54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 217.0
  • Bit_score: 141
  • Evalue 2.00e-31

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 603
ATGCAGACCCGACTGCTTCCCGGGCAGAGCCTTGCCTTACAGCAGGTCCTCTCGCCCCAACTCCAGCAGAGCTTGCTCGTCCTCCAAACGCCGCTGCTTGAGCTGCGCAACCTGGTTCAGCAAGAGATGGAAACAAATCCCGTTCTCGAGGAATTACCGGATGAGCCTGGCCCCGATAGTCAGGACGAAGGCGAATCTTCCGGTGACGATAATTTCGAGAACGAATTCGAGAAGCTCGCGAGCCTGGATGAAGAATGGCGCGATTACATGGCGCAGTCGGCCAGTTCCGGCGCGGACGGCTTTCGGAGTTCGGGAGAAGCGAAAGATAAACGCCAGTTCTTTTTCGATTCCATTGCCGTTCAGGAAACGCTTCAGCAAAATCTGCTGGGACAACTGAATCAGACCGCTCTCAACGCCAGCGACCGCAAAGCTGCGGAGCTAATCGTTGGCAACATCGATGACAAAGGATTTCTCCAAAGCGCACCGGAAGAAATGGCGCTGAACTCGGGAATCCCCCAGGAAGATTTCGAAAAAATGCTGGCGTTGATACAGGGTTTTCATCCGCCAGGAGTTGGCGCGCGCGATTTGCGCGAGTGTTTGCTC
PROTEIN sequence
Length: 201
MQTRLLPGQSLALQQVLSPQLQQSLLVLQTPLLELRNLVQQEMETNPVLEELPDEPGPDSQDEGESSGDDNFENEFEKLASLDEEWRDYMAQSASSGADGFRSSGEAKDKRQFFFDSIAVQETLQQNLLGQLNQTALNASDRKAAELIVGNIDDKGFLQSAPEEMALNSGIPQEDFEKMLALIQGFHPPGVGARDLRECLL