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13_2_20cm_scaffold_1844

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1844_1
unknown

Not on your lists

comp(14..181)
DNA (168bp) protein (56aa)

This feature has no annotations

13_2_20cm_scaffold_1844_2
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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320..646
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G7T5_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:CBN58675.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506
hypothetical protein
13_2_20cm_scaffold_1844_3
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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643..909
DNA (267bp) protein (89aa)
Uncharacterized protein n=6 Tax=Crocosphaera watsonii RepID=G5JCY6_CROWT
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
13_2_20cm_scaffold_1844_4
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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1058..1378
DNA (321bp) protein (107aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=3 Tax=Rhodothermus marinus RepID=D0MG33_RHOM4
fdxA; ferredoxin; K05524 ferredoxin Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
4Fe-4S ferredoxin
13_2_20cm_scaffold_1844_5
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1419..3248)
DNA (1830bp) protein (610aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
aspartyl-tRNA synthase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017468E8 rbh
aspartyl-tRNA synthetase
13_2_20cm_scaffold_1844_6
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(3340..4587)
DNA (1248bp) protein (416aa)
Histidine--tRNA ligase {ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|SAAS:SAAS00043629};; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales
Histidyl-tRNA synthetase n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DX00_METI4
hisS; Histidyl-tRNA synthetase
13_2_20cm_scaffold_1844_7
unknown

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4751..5182
DNA (432bp) protein (144aa)

This feature has no annotations

13_2_20cm_scaffold_1844_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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5378..7048
DNA (1671bp) protein (557aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU00_9BACT
UvrABC system protein C {ECO:0000256|SAAS:SAAS00125834}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
excinuclease ABC subunit C
13_2_20cm_scaffold_1844_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7172..8725
DNA (1554bp) protein (518aa)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:EDY17641.1}; EC=2.4.1.129 {ECO:0000313|EMBL:EDY17641.1};; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthon
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7M4_9BACT
13_2_20cm_scaffold_1844_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8670..9026
DNA (357bp) protein (119aa)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:EDY17641.1}; EC=2.4.1.129 {ECO:0000313|EMBL:EDY17641.1};; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthon
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7M4_9BACT
13_2_20cm_scaffold_1844_11
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(9164..10204)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00035DA275 rbh
tas; oxidoreductase Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
tas; oxidoreductase
13_2_20cm_scaffold_1844_12
Leptospira sp. B5-022, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(10201..11625)
DNA (1425bp) protein (475aa)
Putative membrane protein n=1 Tax=Leptospira sp. B5-022 RepID=M6DAY7_9LEPT
Putative membrane protein {ECO:0000313|EMBL:EMK01348.1}; TaxID=1242992 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira sp. B5-022.;"
hypothetical protein
13_2_20cm_scaffold_1844_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11796..12557
DNA (762bp) protein (254aa)
chelatase (EC:4.99.1.3)
Cobalamin (Vitamin B12) biosynthesis CbiX protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Z3_9BACT
Cobalamin (Vitamin B12) biosynthesis CbiX protein {ECO:0000313|EMBL:EDY20005.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniob
13_2_20cm_scaffold_1844_14
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12605..12784)
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:KIZ17238.1}; TaxID=1240678 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.
13_2_20cm_scaffold_1844_15
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12831..13223)
DNA (393bp) protein (131aa)
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase related protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4RFE9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJT62717.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
13_2_20cm_scaffold_1844_16
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13241..13810)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SE86_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJT62717.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
13_2_20cm_scaffold_1844_17
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

13922..14383
DNA (462bp) protein (154aa)
Putative GAF sensor protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHP1_THET1
GAF domain-containing protein; K07170 GAF domain-containing protein Tax=RBG_16_Chloroflexi_68_14_curated
GAF sensor protein
13_2_20cm_scaffold_1844_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14414..15091
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Z4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20006.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Hypothetical Protein
13_2_20cm_scaffold_1844_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15088..16395
DNA (1308bp) protein (436aa)
Amidohydrolase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Z5_9BACT
Amidohydrolase {ECO:0000313|EMBL:EDY20007.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ssnA; Cytosine deaminase or related metal-dependent hydrolase
13_2_20cm_scaffold_1844_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16473..17075
DNA (603bp) protein (201aa)
RNA polymerase, sigma 54 subunit, RpoN n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D101_9BACT
RNA polymerase, sigma 54 subunit, RpoN {ECO:0000313|EMBL:EDY20013.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
RNA polymerase sigma 54 subunit RpoN
Displaying 20 items

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