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13_2_20cm_scaffold_117

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_117_1
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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982..1422
DNA (441bp) protein (147aa)
Putative AraC-family transcriptional regulator n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TK53_CITRI
AraC family transcriptional regulator
Putative AraC-family transcriptional regulator {ECO:0000313|EMBL:CBG87183.1}; TaxID=637910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;"
13_2_20cm_scaffold_117_2
unknown

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1465..2136
DNA (672bp) protein (224aa)

This feature has no annotations

13_2_20cm_scaffold_117_3
unknown

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2121..2246
DNA (126bp) protein (42aa)

This feature has no annotations

13_2_20cm_scaffold_117_4
unknown

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comp(2450..2578)
DNA (129bp) protein (43aa)

This feature has no annotations

13_2_20cm_scaffold_117_5
Veillonella sp. oral taxon 780, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2746..4011
DNA (1266bp) protein (422aa)
Putative lipid A export permease/ATP-binding protein MsbA n=1 Tax=Veillonella sp. oral taxon 780 str. F0422 RepID=F9N5V6_9FIRM
Putative lipid A export permease/ATP-binding protein MsbA {ECO:0000313|EMBL:EGS34807.1}; TaxID=944564 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" sou
ABC transporter
13_2_20cm_scaffold_117_6
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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4133..5329
DNA (1197bp) protein (399aa)
gamma-glutamyl kinase; K00931 glutamate 5-kinase [EC:2.7.2.11] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Glutamate 5-kinase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RAT1_AMMDK
gamma-glutamyl kinase
13_2_20cm_scaffold_117_7
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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5326..6663
DNA (1338bp) protein (446aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
proA; gamma-glutamyl phosphate reductase ProA (EC:1.2.1.41)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00034D1C67 rbh
13_2_20cm_scaffold_117_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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6973..9030
DNA (2058bp) protein (686aa)
prolyl oligopeptidase; K01322 prolyl oligopeptidase [EC:3.4.21.26] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
prolyl oligopeptidase (EC:3.4.21.26)
Prolyl oligopeptidase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7Y4_SPHTD
13_2_20cm_scaffold_117_9
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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9046..9423
DNA (378bp) protein (126aa)
Conserved domain protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F5P3_ACIC5
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:ACO31647.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain
13_2_20cm_scaffold_117_10
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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9438..11348
DNA (1911bp) protein (637aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B367F0 rbh
asparagine synthetase family
Asparagine synthetase family {ECO:0000313|EMBL:ACO32390.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (str
13_2_20cm_scaffold_117_11
unknown

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comp(11328..11426)
DNA (99bp) protein (33aa)

This feature has no annotations

13_2_20cm_scaffold_117_12
unknown

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11485..11628
DNA (144bp) protein (48aa)

This feature has no annotations

13_2_20cm_scaffold_117_13
unknown

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11754..11900
DNA (147bp) protein (49aa)

This feature has no annotations

13_2_20cm_scaffold_117_14
unknown

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12012..12149
DNA (138bp) protein (46aa)

This feature has no annotations

13_2_20cm_scaffold_117_15
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(12220..14370)
DNA (2151bp) protein (717aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D3Q5_SPHYA
peptidase S9 prolyl oligopeptidase active site domain-containing protein Tax=RBG_13_Acidobacteria_68_16_curated
prolyl oligopeptidase family protein
13_2_20cm_scaffold_117_16
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(14403..17705)
DNA (3303bp) protein (1101aa)
Cna protein B-type domain, TonB-dependent Receptor Plug Domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJN6_CHLTF rbh
Cna protein B-type domain-containing protein
Cna protein B-type domain, TonB-dependent Receptor Plug Domain protein {ECO:0000313|EMBL:AEP13053.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;"
13_2_20cm_scaffold_117_17
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(17957..19252)
DNA (1296bp) protein (432aa)
Anti-sigma K factor RskA n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UZN2_TERSS
anti-sigma-K factor RskA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
anti-sigma K factor RskA
13_2_20cm_scaffold_117_18
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(19266..19934)
DNA (669bp) protein (223aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UZN3_TERSS
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
ECF subfamily RNA polymerase sigma-24 factor
13_2_20cm_scaffold_117_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(21490..23976)
DNA (2487bp) protein (829aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITI6_KORVE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_117_20
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(24086..24505)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037AAEF9
hypothetical protein; K06925 UPF0079 ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_2_20cm_scaffold_117_21
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(24498..26108)
DNA (1611bp) protein (537aa)
carbohydrate kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
carbohydrate kinase id=12554112 bin=CNBR_ACIDO species=Desulfotomaculum nigrificans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
carbohydrate kinase
13_2_20cm_scaffold_117_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(26877..28865)
DNA (1989bp) protein (663aa)
Serine phosphatase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS13_KORVE
serine phosphatase
Serine phosphatase {ECO:0000313|EMBL:ABF40337.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ell
Displaying 22 items

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