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13_2_20cm_scaffold_1405

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1405_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

1..591
DNA (591bp) protein (197aa)
hypothetical protein GobsU_12882 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4DDE id=5223865 bin=16ft_combo_ws3_JS1 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
DMT(drug/metabolite transporter) superfamily permease
13_2_20cm_scaffold_1405_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

687..1769
DNA (1083bp) protein (361aa)
ada; regulatory protein Ada (EC:2.1.1.63)
ada; regulatory protein Ada (EC:2.1.1.63); K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] T
Regulatory protein Ada n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N1W9_ANATU
13_2_20cm_scaffold_1405_3
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(1837..2541)
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWJ6_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein
13_2_20cm_scaffold_1405_4
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2670..3056)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SD8_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein
13_2_20cm_scaffold_1405_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3058..3804)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000367CA26
ABC transporter, ATPase subunit; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
ABC transporter ATPase
13_2_20cm_scaffold_1405_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3877..4974)
DNA (1098bp) protein (366aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU86_KORVE
ABC efflux pump, inner membrane subunit Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
efflux ABC transporter inner membrane protein
13_2_20cm_scaffold_1405_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(4971..5885)
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NF7_SOLUE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_1405_8
unknown

Not on your lists

comp(5976..6578)
DNA (603bp) protein (201aa)

This feature has no annotations

13_2_20cm_scaffold_1405_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6575..7132)
DNA (558bp) protein (186aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65617.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_2_20cm_scaffold_1405_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7129..8235)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003662981
aminodeoxychorismate lyase; K07082 UPF0755 protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
aminodeoxychorismate lyase
13_2_20cm_scaffold_1405_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8268..8909)
DNA (642bp) protein (214aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Putative Holliday junction resolvase n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B2K4_9FIRM
RNAse H-fold protein YqgF
13_2_20cm_scaffold_1405_12
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8872..10386)
DNA (1515bp) protein (505aa)
peptidase, m28d (aminopeptidase es-62) subfamily (EC:3.4.-.-)
Peptidase M28 family protein {ECO:0000313|EMBL:EAU63242.1}; Peptidase, M28D (Aminopeptidase ES-62) subfamily {ECO:0000313|EMBL:ADO69102.1}; EC=3.4.-.- {ECO:0000313|EMBL:ADO69102.1};; TaxID=378806 spec
Peptidase M28 family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08RW8_STIAD
13_2_20cm_scaffold_1405_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(10500..11312)
DNA (813bp) protein (271aa)
folP; dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E690_GEOLS
13_2_20cm_scaffold_1405_14
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11428..12381)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V6C2_TERSS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV81587.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanens
13_2_20cm_scaffold_1405_15
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(12681..12989)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPL7_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_2_20cm_scaffold_1405_16
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13073..15022)
DNA (1950bp) protein (650aa)
FtsH peptidase; K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVN1_KORVE
FtsH peptidase
13_2_20cm_scaffold_1405_17
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(15071..15634)
DNA (564bp) protein (188aa)
Hpt; hypoxanthine-guanine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Phosphoribosyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVN2_KORVE
phosphoribosyltransferase
13_2_20cm_scaffold_1405_18
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(15627..17054)
DNA (1428bp) protein (476aa)
tRNA(Ile)-lysidine synthetase-like; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] id=16822922 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
tRNA(Ile)-lysidine synthetase
Displaying 18 items

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