ggKbase home page

13_2_20cm_scaffold_150

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_150_1
unknown

Not on your lists

3..266
DNA (264bp) protein (88aa)

This feature has no annotations

13_2_20cm_scaffold_150_2
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(346..2718)
DNA (2373bp) protein (791aa)
DNA translocase FtsK n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WE5_SOLUE rbh
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
DNA translocase FtsK
13_2_20cm_scaffold_150_3
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2848..3279)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U3A3_DEIML
Uncharacterized protein {ECO:0000313|EMBL:KGQ18091.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdone
hypothetical protein
13_2_20cm_scaffold_150_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3325..4218)
DNA (894bp) protein (298aa)
Undecaprenyl-diphosphatase {ECO:0000255|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000255|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000255|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
Undecaprenyl-diphosphatase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=UPPP_KORVE rbh
UDP-diphosphatase
13_2_20cm_scaffold_150_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(4215..4700)
DNA (486bp) protein (162aa)
acetyltransferase, GNAT family; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
GCN5-related N-acetyltransferase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFE5_9BACT
GNAT family acetyltransferase
13_2_20cm_scaffold_150_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4745..5887)
DNA (1143bp) protein (381aa)
Glycoside hydrolase family 5 n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AUL8_HERA2
Endoglucanase {ECO:0000313|EMBL:CDM67132.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glycoside hydrolase
13_2_20cm_scaffold_150_7
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5976..7376)
DNA (1401bp) protein (467aa)
Aldehyde dehydrogenase {ECO:0000313|EMBL:EGJ34173.1}; EC=1.2.99.3 {ECO:0000313|EMBL:EGJ34173.1};; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" sourc
aldehyde dehydrogenase (EC:1.2.99.3)
betaine-aldehyde dehydrogenase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037A9212
13_2_20cm_scaffold_150_8
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8025..10100
DNA (2076bp) protein (692aa)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI000375D6C9
Uncharacterized protein {ECO:0000313|EMBL:KFA88394.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
13_2_20cm_scaffold_150_9
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10145..11047)
DNA (903bp) protein (301aa)
Dehydrogenase protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EUF9_9RHIZ
Dehydrogenase protein {ECO:0000313|EMBL:CCV03326.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metal
short-chain dehydrogenase/reductase SDR
13_2_20cm_scaffold_150_10
unknown

Not on your lists

11146..11760
DNA (615bp) protein (205aa)

This feature has no annotations

13_2_20cm_scaffold_150_11
unknown

Not on your lists

comp(11921..12076)
DNA (156bp) protein (52aa)

This feature has no annotations

13_2_20cm_scaffold_150_12
unknown

Not on your lists

comp(12285..12641)
DNA (357bp) protein (119aa)

This feature has no annotations

13_2_20cm_scaffold_150_13
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12863..14227)
DNA (1365bp) protein (455aa)
MFS transporter n=1 Tax=Methylosinus sp. LW4 RepID=UPI00035E1C9D rbh
MFS transporter {ECO:0000313|EMBL:KFA88393.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacte
tetracycline-efflux transporter
13_2_20cm_scaffold_150_14
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14243..15910)
DNA (1668bp) protein (556aa)
beta-lactamase domain-containing protein; K12574 ribonuclease J [EC:3.1.-.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003788DAA
beta-lactamase-like protein
13_2_20cm_scaffold_150_15
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16028..16333)
DNA (306bp) protein (102aa)
Transglycosylase-associated protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CW93_9BURK
Transglycosylase-associated protein {ECO:0000313|EMBL:EIJ47886.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Her
transglycosylase associated family protein
13_2_20cm_scaffold_150_16
RLO_PLX_64_10, Bacteria

Not on your lists

comp(16499..17524)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000378E62D
peptidylarginine deiminase-like protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
peptidylarginine deiminase-like protein
13_2_20cm_scaffold_150_17
RLO_PLX_64_10, Bacteria

Not on your lists

comp(17825..18718)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036FE280
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
amidohydrolase
13_2_20cm_scaffold_150_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

18879..19952
DNA (1074bp) protein (358aa)
Homospermidine synthase (Spermidine-specific) {ECO:0000313|EMBL:ABF40943.1}; EC=2.5.1.45 {ECO:0000313|EMBL:ABF40943.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriac
Homospermidine synthase (Spermidine-specific) n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQA7_KORVE
deoxyhypusine synthase
13_2_20cm_scaffold_150_19
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

20062..20652
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AI9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ81927.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_2_20cm_scaffold_150_20
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20656..21288
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ES19_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06021.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiatic
13_2_20cm_scaffold_150_21
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(21319..21876)
DNA (558bp) protein (186aa)
pyruvoyl-dependent arginine decarboxylase (EC:4.1.1.19); K02626 arginine decarboxylase [EC:4.1.1.19] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Arginine decarboxylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQA5_KORVE
pyruvoyl-dependent arginine decarboxylase
13_2_20cm_scaffold_150_22
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(22040..22630)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INI0_KORVE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_150_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

22828..23484
DNA (657bp) protein (219aa)
Succinate dehydrogenase subunit C {ECO:0000313|EMBL:ABF41571.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ABF41571.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidat
Succinate dehydrogenase subunit C n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INH9_KORVE
succinate dehydrogenase subunit C
13_2_20cm_scaffold_150_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

23481..25265
DNA (1785bp) protein (595aa)
Succinate dehydrogenase subunit A {ECO:0000313|EMBL:ABF41572.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ABF41572.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidat
Succinate dehydrogenase subunit A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INH8_KORVE
sdhA; succinate dehydrogenase flavoprotein subunit
13_2_20cm_scaffold_150_25
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

25308..26060
DNA (753bp) protein (251aa)
Succinate dehydrogenase subunit B {ECO:0000313|EMBL:ABF41573.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ABF41573.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidat
Succinate dehydrogenase subunit B n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INH7_KORVE
sdhB; succinate dehydrogenase iron-sulfur subunit
13_2_20cm_scaffold_150_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

26119..27339
DNA (1221bp) protein (407aa)
M19 family peptidase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UKB3_MYXSD
M19 family peptidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
M19 family peptidase
13_2_20cm_scaffold_150_27
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

27387..28190
DNA (804bp) protein (268aa)
peptidyl-prolyl cis-trans isomerase PpiA precursor (EC:5.2.1.8)
cyclophilin type peptidyl-prolyl cis-trans isomerase id=24533233 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Schlesneria paludicola genus=Schlesneria taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
cyclophilin type peptidyl-prolyl cis-trans isomerase Tax=RBG_16_RIF_WS3X_71_46_curated
13_2_20cm_scaffold_150_28
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

28505..29152
DNA (648bp) protein (216aa)
putative sulfite reductase, contains SirA-like domain (EC:1.8.7.1); K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
putative sulfite reductase, contains SirA-like domain (EC:1.8.7.1)
Ferredoxin--nitrite reductase id=4066346 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_2_20cm_scaffold_150_29
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

29128..30219
DNA (1092bp) protein (364aa)
Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SL4_SOLUE
nitrite/sulfite reductase hemoprotein subunit beta
Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein {ECO:0000313|EMBL:ABJ87356.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibactera
13_2_20cm_scaffold_150_30
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

30216..30992
DNA (777bp) protein (259aa)
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:ABF41376.1}; EC=2.1.1.107 {ECO:0000313|EMBL:ABF41376.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae;
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP24_KORVE
uroporphyrinogen-III C-methyltransferase
Displaying items 1-30 of 41 in total

View Taxonomy