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13_2_20cm_scaffold_1903

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1903_1
unknown

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522..992
DNA (471bp) protein (157aa)

This feature has no annotations

13_2_20cm_scaffold_1903_2
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

1164..3320
DNA (2157bp) protein (719aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit beta (EC:1.2.4.4)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit {ECO:0000313|EMBL:AEP12697.1}; EC=1.2.4.4 {ECO:0000313|EMBL:AEP12697.1};; TaxID=981222 specie
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHN3_CHLTF
13_2_20cm_scaffold_1903_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

3421..3753
DNA (333bp) protein (111aa)
Conserved domain protein n=2 Tax=Streptococcus pneumoniae RepID=B1IBL7_STRPI
two-component system, sensory transduction histidine kinase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_1903_4
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3836..4591)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000382DA0F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV83242.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA
13_2_20cm_scaffold_1903_5
unknown

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comp(4830..5105)
DNA (276bp) protein (92aa)

This feature has no annotations

13_2_20cm_scaffold_1903_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(5291..5698)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379AF02
DoxX family protein
DoxX family protein; K15977 putative oxidoreductase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_2_20cm_scaffold_1903_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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5897..6949
DNA (1053bp) protein (351aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIF2_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43348.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_2_20cm_scaffold_1903_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6946..7920
DNA (975bp) protein (325aa)
ornithine cyclodeaminase (EC:4.3.1.12) Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
ornithine cyclodeaminase; K01750 ornithine cyclodeaminase [EC:4.3.1.12] id=14630753 bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
ornithine cyclodeaminase (EC:4.3.1.12)
13_2_20cm_scaffold_1903_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(7930..8169)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN55_KORVE
transmembrane anti-sigma factor Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_1903_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(8166..8855)
DNA (690bp) protein (230aa)
RNA polymerase sigma factor n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F7G4_ACIC5
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ECF subfamily RNA polymerase sigma-70 factor
13_2_20cm_scaffold_1903_11
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

9113..9610
DNA (498bp) protein (166aa)
hypothetical protein ; K03649 TDG/mug DNA glycosylase family protein [EC:3.2.2.-] Tax=RBG_16_Chloroflexi_68_14_curated
ADP-ribosylation/Crystallin J1 n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZWK6_MAHA5
ADP-ribosylation/Crystallin J1
13_2_20cm_scaffold_1903_12
unknown

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comp(9740..10258)
DNA (519bp) protein (173aa)

This feature has no annotations

13_2_20cm_scaffold_1903_13
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

10744..11190
DNA (447bp) protein (149aa)
enoyl-CoA hydratase/carnithine racemase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIV9_9BACT
Enoyl-CoA hydratase {ECO:0000313|EMBL:BAL56095.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
13_2_20cm_scaffold_1903_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

11194..11517
DNA (324bp) protein (108aa)
putative thiosulfate sulfurtransferase GlpE (EC:2.8.1.1)
Putative Thiosulfate sulfurtransferase GlpE n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7P9_9BACT
rhodanese/sulfurtransferase-like protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_2_20cm_scaffold_1903_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

11671..11940
DNA (270bp) protein (90aa)
Arsenate reductase related protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024V9_SOLUE
arsenate reductase
Arsenate reductase related protein {ECO:0000313|EMBL:ABJ83467.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibac
13_2_20cm_scaffold_1903_16
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

12031..12909
DNA (879bp) protein (293aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
3-hydroxybutyryl-CoA dehydrogenase n=3 Tax=Geobacillus RepID=C9RTN7_GEOSY
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
13_2_20cm_scaffold_1903_17
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

12940..13128
DNA (189bp) protein (63aa)
appr-1-p processing domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
appr-1-p processing domain-containing protein id=14426669 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
appr-1-p processing domain protein
13_2_20cm_scaffold_1903_18
unknown

Not on your lists

13276..13434
DNA (159bp) protein (53aa)

This feature has no annotations

13_2_20cm_scaffold_1903_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

13431..14546
DNA (1116bp) protein (372aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Putative uncharacterized protein id=3705139 bin=GWF2_Geobacter_54_21 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
13_2_20cm_scaffold_1903_20
unknown

Not on your lists

comp(15069..15587)
DNA (519bp) protein (173aa)

This feature has no annotations

13_2_20cm_scaffold_1903_21
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(15729..17882)
DNA (2154bp) protein (718aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036AE2FA
peptidase M1, membrane alanine aminopeptidase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
aminopeptidase N
13_2_20cm_scaffold_1903_22
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(17944..19110)
DNA (1167bp) protein (389aa)
lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=LPXB_SOLUE
13_2_20cm_scaffold_1903_23
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(19129..21045)
DNA (1917bp) protein (639aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003818002
ABC transporter, ATPase subunit; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ABC transporter ATPase
13_2_20cm_scaffold_1903_24
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(21042..21440)
DNA (399bp) protein (133aa)
ABC transporter related protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WW76_ACISM
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADW68459.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (str
Displaying 24 items

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