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13_2_20cm_scaffold_2535

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2535_1
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..336)
DNA (336bp) protein (112aa)
NADH dehydrogenase subunit B; K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
NADH-quinone oxidoreductase subunit B n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F315_ACIC5
NADH dehydrogenase subunit B
13_2_20cm_scaffold_2535_2
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(392..1903)
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031BF935
trkA; monooxygenase protein
Monooxygenase protein {ECO:0000313|EMBL:AEG67721.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum
13_2_20cm_scaffold_2535_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1900..2826)
DNA (927bp) protein (309aa)
Caprolactone hydrolase (EC:3.1.1.-)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031BF935
Lipase/esterase/arylesterase {ECO:0000313|EMBL:GAN76426.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphae
13_2_20cm_scaffold_2535_4
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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comp(2974..4299)
DNA (1326bp) protein (442aa)
Thiol oxidoreductase-like protein n=1 Tax=uncultured Acidobacteria bacterium RepID=F2YWV5_9BACT
Thiol oxidoreductase-like protein {ECO:0000313|EMBL:AEA09215.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
thiol oxidoreductase-like protein
13_2_20cm_scaffold_2535_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(4498..5526)
DNA (1029bp) protein (343aa)
Alcohol dehydrogenase, zinc-binding domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024Z7_SOLUE rbh
alcohol dehydrogenase
Alcohol dehydrogenase, zinc-binding domain protein {ECO:0000313|EMBL:ABJ83429.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;"
13_2_20cm_scaffold_2535_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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5742..6158
DNA (417bp) protein (139aa)
Amino acid-binding ACT domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HD02_ANADF
ACT domain-containing protein Tax=RBG_16_Acidobacteria_70_10_curated
amino acid-binding ACT domain-containing protein
13_2_20cm_scaffold_2535_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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6321..7157
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INA2_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_2_20cm_scaffold_2535_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7168..7755
DNA (588bp) protein (196aa)
4-diphosphocytidyl-2C-methyl-D-erythritolsynthas E id=2013955 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
molybdenum hydroxylase accessory protein, YgfJ family Tax=GWD2_Deltaproteobacteria_55_8_curated
molybdenum hydroxylase accessory protein, YgfJ family
13_2_20cm_scaffold_2535_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(7752..8120)
DNA (369bp) protein (123aa)
Nitrogen-fixing NifU domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023P2_SOLUE
NifU domain-containing protein
Nitrogen-fixing NifU domain protein {ECO:0000313|EMBL:ABJ83798.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soliba
13_2_20cm_scaffold_2535_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8247..9269)
DNA (1023bp) protein (341aa)
Acetamidase/Formamidase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QGJ7_CATAD
acetamidase/formamidase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
acetamidase/formamidase
13_2_20cm_scaffold_2535_11
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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9406..10173
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003642D6C
iron chelate ABC transporter substrate-binding protein
ABC transporter, iron chelate uptake transporter (FeCT) family, periplasmic substrate-binding protein {ECO:0000313|EMBL:ACO32266.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Ac
13_2_20cm_scaffold_2535_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

10170..10628
DNA (459bp) protein (153aa)
hydrolase, NUDIX family; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Pyrimidine (Deoxy)nucleoside triphosphate pyrophosphohydrolase n=1 Tax=mine drainage metagenome RepID=E6QHN1_9ZZZZ
NUDIX hydrolase
13_2_20cm_scaffold_2535_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10665..12752)
DNA (2088bp) protein (696aa)
2-oxo-acid dehydrogenase E1 subunit, homodimeric type; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
2-oxo-acid dehydrogenase E1 subunit, homodimeric type; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] id=14426105 bin=bin1_lowGC species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
2-oxo-acid dehydrogenase E1 subunit, homodimeric type
13_2_20cm_scaffold_2535_14

Not on your lists

comp(12742..13293)
DNA (552bp) protein (184aa)
2-oxo-acid dehydrogenase E1 subunit, homodimeric type; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] id=14426105 bin=bin1_lowGC species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
aceE; pyruvate dehydrogenase subunit E1 (EC:1.2.4.1)
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:AIA16244.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_2_20cm_scaffold_2535_15

Not on your lists

comp(13474..14136)
DNA (663bp) protein (221aa)
Short chain dehydrogenase {ECO:0000313|EMBL:AIA10874.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Short-chain dehydrogenase/reductase SDR id=4830673 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short-chain dehydrogenase/reductase SDR
13_2_20cm_scaffold_2535_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

14335..14715
DNA (381bp) protein (127aa)
LmbE family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X51_SOLUE
LmbE family protein
LmbE family protein {ECO:0000313|EMBL:ABJ85764.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (s
13_2_20cm_scaffold_2535_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

14675..15007
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003776152
LmbE family protein
LmbE family protein {ECO:0000313|EMBL:ABJ85764.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (s
13_2_20cm_scaffold_2535_18
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(15011..15238)
DNA (228bp) protein (76aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
13_2_20cm_scaffold_2535_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

15489..16613
DNA (1125bp) protein (375aa)
Peptidase M48, Ste24p n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INI2_KORVE
peptidase M48, Ste24p Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
peptidase M48, Ste24p
13_2_20cm_scaffold_2535_20
unknown

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comp(16717..17256)
DNA (540bp) protein (180aa)

This feature has no annotations

13_2_20cm_scaffold_2535_21
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(17435..19621)
DNA (2187bp) protein (729aa)
signal transduction histidine kinase (EC:2.1.1.80 3.1.1.61)
Protein-glutamate methylesterase {ECO:0000256|SAAS:SAAS00158471}; EC=3.1.1.61 {ECO:0000256|SAAS:SAAS00158471};; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" sour
Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3MGE6_ANAVT
Displaying 21 items

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