ggKbase home page

13_2_20cm_scaffold_382

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_382_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

96..1052
DNA (957bp) protein (319aa)
Beta-lactamase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUU2_KORVE rbh
beta-lactamase-like protein
Beta-lactamase-like protein {ECO:0000313|EMBL:ABF39358.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Korib
13_2_20cm_scaffold_382_2
unknown

Not on your lists

comp(1106..1543)
DNA (438bp) protein (146aa)

This feature has no annotations

13_2_20cm_scaffold_382_3
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(1640..2656)
DNA (1017bp) protein (339aa)
dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase [EC:1.3.1.26] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Dihydrodipicolinate reductase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NN21_ROSCS
dihydrodipicolinate reductase
13_2_20cm_scaffold_382_4
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

2876..3166
DNA (291bp) protein (97aa)
dcoH1; putative pterin-4-alpha-carbinolamine dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B78D35
transcriptional coactivator/pterin dehydratase
13_2_20cm_scaffold_382_5
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3197..4177
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium CSL1 RepID=G4WVB3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGB81441.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI2
hypothetical protein
13_2_20cm_scaffold_382_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4675..5463
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036EEA5F
ABC transporter ATPase
ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABF40607.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatili
13_2_20cm_scaffold_382_7

Not on your lists

comp(5486..7093)
DNA (1608bp) protein (536aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C8385
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49274.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative peptidase M20 family protein
13_2_20cm_scaffold_382_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(7154..8176)
DNA (1023bp) protein (341aa)
Glycosyl hydrolase, BNR repeat-containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026F2_SOLUE
BNR repeat-containing glycosyl hydrolase
Glycosyl hydrolase, BNR repeat-containing protein {ECO:0000313|EMBL:ABJ83117.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candid
13_2_20cm_scaffold_382_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

8485..10557
DNA (2073bp) protein (691aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:ABJ83546.1}; EC=1.1.5.2 {ECO:0000313|EMBL:ABJ83546.1};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibactera
Quinoprotein glucose dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024N0_SOLUE rbh
13_2_20cm_scaffold_382_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

10580..11065
DNA (486bp) protein (162aa)
Cytochrome c, class I n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024M9_SOLUE
class I cytochrome c
Cytochrome c, class I {ECO:0000313|EMBL:ABJ83547.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus
13_2_20cm_scaffold_382_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11140..11868
DNA (729bp) protein (243aa)
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:CDM64163.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_2_20cm_scaffold_382_12
unknown

Not on your lists

comp(11900..12418)
DNA (519bp) protein (173aa)

This feature has no annotations

13_2_20cm_scaffold_382_13
unknown

Not on your lists

comp(12483..13424)
DNA (942bp) protein (314aa)

This feature has no annotations

13_2_20cm_scaffold_382_14
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(13536..14162)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T0_GEMAT
hypothetical protein Tax=RBG_16_Caldithrix_48_16_curated
hypothetical protein
13_2_20cm_scaffold_382_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14385..15707
DNA (1323bp) protein (441aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIC3_KORVE
efflux ABC transporter inner membrane protein
ABC efflux pump, inner membrane subunit {ECO:0000313|EMBL:ABF43377.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" s
13_2_20cm_scaffold_382_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15748..15993
DNA (246bp) protein (82aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIC4_KORVE
efflux ABC transporter inner membrane protein
ABC efflux pump, inner membrane subunit {ECO:0000313|EMBL:ABF43376.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
13_2_20cm_scaffold_382_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

16038..16925
DNA (888bp) protein (296aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SBT1_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_382_18
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16972..18564)
DNA (1593bp) protein (531aa)
putative non-specific serine/threonine protein kinase (EC:2.7.11.1)
Serine/threonine protein kinase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WMS5_9BURK
serine/threonine protein kinase Tax=CG_Delta_02
13_2_20cm_scaffold_382_19
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18509..19414)
DNA (906bp) protein (302aa)
Serine/threonine protein kinase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QP58_AZOSU
serine/threonine protein kinase Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
serine/threonine protein kinase
13_2_20cm_scaffold_382_20
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19604..20227)
DNA (624bp) protein (208aa)
protein tyrosine/serine phosphatase Tax=RBG_16_Gamma2_64_10_curated
Protein tyrosine/serine phosphatase id=2838901 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
protein tyrosine/serine phosphatase
13_2_20cm_scaffold_382_21
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20827..23589
DNA (2763bp) protein (921aa)
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RBG_16_Gamma2_64_10_curated
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1)
Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037C4387
13_2_20cm_scaffold_382_22
unknown

Not on your lists

23621..24070
DNA (450bp) protein (150aa)

This feature has no annotations

13_2_20cm_scaffold_382_23
unknown

Not on your lists

comp(24002..24256)
DNA (255bp) protein (85aa)

This feature has no annotations

13_2_20cm_scaffold_382_24
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(24657..25802)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035DC35C
TonB family protein; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
TonB family protein
13_2_20cm_scaffold_382_25
unknown

Not on your lists

26350..26553
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying 25 items

View Taxonomy