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13_2_20cm_scaffold_1060

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1060_1
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..1287)
DNA (1287bp) protein (429aa)
PppGpp 5'-phosphohydrolase and exopolyphosphatase, HD domain-containing n=2 Tax=Geobacter sulfurreducens RepID=D7AKU2_GEOSK
Exopolyphosphatase {ECO:0000313|EMBL:KIE41594.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
gppA-2; pppGpp 5'-phosphohydrolase and exopolyphosphatase, HD domain-containing
13_2_20cm_scaffold_1060_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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1471..2280
DNA (810bp) protein (270aa)
polyphosphate:AMP phosphotransferase (EC:2.7.4.-)
Polyphosphate:AMP phosphotransferase {ECO:0000313|EMBL:ABJ82079.1}; EC=2.7.4.- {ECO:0000313|EMBL:ABJ82079.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacterac
Polyphosphate:AMP phosphotransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A47_SOLUE rbh
13_2_20cm_scaffold_1060_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2294..2737)
DNA (444bp) protein (148aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ5_GEMAT
phoB; phosphate regulon transcriptional regulatory protein PhoB; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curat
response regulator receiver
13_2_20cm_scaffold_1060_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(2955..4682)
DNA (1728bp) protein (576aa)
phoR; phosphate regulon sensor protein PhoR; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curat
Phosphate regulon sensor protein PhoR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ6_GEMAT
phoR; phosphate regulon sensor protein PhoR
13_2_20cm_scaffold_1060_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4679..5431)
DNA (753bp) protein (251aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ5_GEMAT
phoB; phosphate regulon transcriptional regulatory protein PhoB; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curat
phoB; phosphate regulon transcriptional regulatory protein PhoB
13_2_20cm_scaffold_1060_6
unknown

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comp(5428..5703)
DNA (276bp) protein (92aa)

This feature has no annotations

13_2_20cm_scaffold_1060_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(5709..6599)
DNA (891bp) protein (297aa)
Putative hydrolase (Metallo-beta-lactamase superfamily) n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN56_SINAD
hydrolase
Putative hydrolase (Metallo-beta-lactamase superfamily) {ECO:0000313|EMBL:AGA30809.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphae
13_2_20cm_scaffold_1060_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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6653..8230
DNA (1578bp) protein (526aa)
cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (EC:3.1.4.16) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
2',3'-cyclic-nucleotide 2'-phosphodiesterase; K01119 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] id=24473036 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin rbh
5'-Nucleotidase domain-containing protein
13_2_20cm_scaffold_1060_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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8227..9474
DNA (1248bp) protein (416aa)
cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (EC:3.1.4.16) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Adenosine deaminase n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DC52_MYXXD
adenosine deaminase
13_2_20cm_scaffold_1060_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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9474..10892
DNA (1419bp) protein (473aa)
Putative Na+(H+)/nucleoside cotransporter n=1 Tax=mine drainage metagenome RepID=E6QL85_9ZZZZ
Na+ dependent nucleoside transporter; K03317 concentrative nucleoside transporter, CNT family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Na+ dependent nucleoside transporter
13_2_20cm_scaffold_1060_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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10913..11650
DNA (738bp) protein (246aa)
punA; purine nucleoside phosphorylase (EC:2.4.2.1); K03783 purine-nucleoside phosphorylase [EC:2.4.2.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
punA; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ0_GEMAT
13_2_20cm_scaffold_1060_12
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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11805..14405
DNA (2601bp) protein (867aa)
membrane associated hydrolase Tax=GWC2_Ignavibacteria_rel_36_12_curated
Putative membrane associated hydrolase id=4183989 bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
membrane associated hydrolase
13_2_20cm_scaffold_1060_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(14443..15153)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DI36_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ35110.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
13_2_20cm_scaffold_1060_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(15801..16628)
DNA (828bp) protein (276aa)
Phosphomethylpyrimidine kinase (ThiD) n=2 Tax=Thermus thermophilus RepID=Q5SKG3_THET8
phosphomethylpyrimidine kinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phosphomethylpyrimidine kinase ThiD
13_2_20cm_scaffold_1060_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(16639..17520)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00036F3258
peptidase M48 Ste24p
Peptidase M48 Ste24p {ECO:0000313|EMBL:AHG91371.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1060_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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17612..18313
DNA (702bp) protein (234aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B408_DESCC
rRNA methyltransferase; K03437 RNA methyltransferase, TrmH family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
tRNA/rRNA methyltransferase (SpoU)
13_2_20cm_scaffold_1060_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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18303..19088
DNA (786bp) protein (262aa)
pilD; leader peptidase/N-methyltransferase (EC:2.1.1.- 3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68
pilD; leader peptidase/N-methyltransferase (EC:2.1.1.- 3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY7_GEMAT
13_2_20cm_scaffold_1060_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19094..19531
DNA (438bp) protein (146aa)
AAA ATPase central domain protein
AAA ATPase central domain protein {ECO:0000313|EMBL:AHG91368.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Chaperone id=3525586 bin=GWA2_Elusimicrobia_66_18 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Displaying 18 items

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