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13_2_20cm_scaffold_1101

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1101_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1..687
DNA (687bp) protein (229aa)
Macrolide-specific efflux protein MacA n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQP0_STIAD id=5224472 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
macrolide-specific efflux protein maca; K02005 HlyD family secretion protein Tax=RBG_16_RIF_WS3X_71_46_curated
13_2_20cm_scaffold_1101_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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684..2081
DNA (1398bp) protein (466aa)
Macrolide-specific efflux protein MacA n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQP0_STIAD id=5224472 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
macrolide-specific efflux protein maca; K02005 HlyD family secretion protein Tax=RBG_16_RIF_WS3X_71_46_curated
RND family efflux transporter MFP subunit
13_2_20cm_scaffold_1101_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2084..3298
DNA (1215bp) protein (405aa)
Putative macrolide efflux ABC transporter permease n=3 Tax=Myxococcus RepID=F8CKF2_MYXFH id=5224471 bin=16ft_combo_ws3_JS1 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative macrolide efflux ABC transporter permease; K02004 putative ABC transport system permease protein Tax=RBG_16_RIF_WS3X_71_46_curated
putative macrolide efflux ABC transporter permease
13_2_20cm_scaffold_1101_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3427..5736
DNA (2310bp) protein (770aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9E2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_scaffold_1101_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5792..7414
DNA (1623bp) protein (541aa)
Methyl-accepting chemotaxis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H1_GEMAT
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis protein
13_2_20cm_scaffold_1101_6

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comp(7435..8019)
DNA (585bp) protein (195aa)
Candidate response regulator, NarL n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX74_RAMTT
Uncharacterized protein {ECO:0000313|EMBL:KKL16352.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
response regulator NarL
13_2_20cm_scaffold_1101_7

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comp(8137..8841)
DNA (705bp) protein (235aa)
Excisionase/Xis, DNA-binding n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NUW0_9DELT
Transcriptional repressor of DCM dehalogenase {ECO:0000313|EMBL:AHN97947.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
excisionase family DNA binding domain-containing protein
13_2_20cm_scaffold_1101_8
Streptomyces griseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8931..9956
DNA (1026bp) protein (342aa)
Transcriptional regulator, LysR family n=2 Tax=Streptomyces griseus RepID=G0PTK8_STRGR
LysR family transcriptional regulator
Putative LysR-family transcriptional regulator {ECO:0000313|EMBL:BAG18210.1}; TaxID=455632 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces
13_2_20cm_scaffold_1101_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(9901..10683)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000364E6A7
cytochrome c, class I Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
cytochrome c, class I
13_2_20cm_scaffold_1101_10
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10852..12228)
DNA (1377bp) protein (459aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WQU8_KYRT2
amidohydrolase domain-containing protein Tax=RBG_16_Deltaproteobacteria_71_12_curated
amidohydrolase
13_2_20cm_scaffold_1101_11
unknown

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comp(12234..12749)
DNA (516bp) protein (172aa)

This feature has no annotations

13_2_20cm_scaffold_1101_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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12915..13505
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MWF5_CORCM
Di-heme cytochrome, transmembrane
Di-heme cytochrome, transmembrane {ECO:0000313|EMBL:AHG87864.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1101_13
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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13498..14211
DNA (714bp) protein (238aa)
Oxidoreductase molybdopterin binding n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J5N4_ANAD2
molybdopterin binding oxidoreductase
Molybdopterin-binding protein {ECO:0000313|EMBL:KFA91690.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sour
13_2_20cm_scaffold_1101_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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comp(14226..15404)
DNA (1179bp) protein (393aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=24466825 bin=RBG_19FT_COMBO_GAL15_69_19 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_2_20cm_scaffold_1101_15
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15497..16198
DNA (702bp) protein (234aa)
Putative transcriptional regulator n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XFI0_NAKMY
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ACV79957.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (stra
13_2_20cm_scaffold_1101_16
unknown

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comp(16350..16490)
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 16 items

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