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13_2_20cm_scaffold_12670

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_12670_1
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(1..522)
DNA (522bp) protein (174aa)
type 11 methyltransferase id=24550730 bin=RBG_19FT_COMBO_GAL15_69_19 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
type 11 methyltransferase Tax=RBG_16_Armatimonadetes_67_12_curated
type 11 methyltransferase
13_2_20cm_scaffold_12670_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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comp(537..1202)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00035EB63D
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein
13_2_20cm_scaffold_12670_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1275..1871
DNA (597bp) protein (199aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=uncultured prokaryote RepID=H5S8U6_9ZZZZ
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG93808.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_12670_4
unknown

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1868..2449
DNA (582bp) protein (194aa)

This feature has no annotations

13_2_20cm_scaffold_12670_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2446..2940)
DNA (495bp) protein (165aa)
Transcription elongation factor GreA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM5_GEMAT
transcription elongation factor GreA/GreB domain-containing protein
Transcription elongation factor GreA/GreB domain-containing protein {ECO:0000313|EMBL:AHG87594.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_12670_6
unknown

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3013..3801
DNA (789bp) protein (263aa)

This feature has no annotations

13_2_20cm_scaffold_12670_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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3798..4244
DNA (447bp) protein (149aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627168 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_12670_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4241..4486
DNA (246bp) protein (82aa)
fer; putative ferredoxin; K05337 ferredoxin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
fer; putative ferredoxin; K05337 ferredoxin id=1242375 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
putative ferredoxin
13_2_20cm_scaffold_12670_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4563..6536
DNA (1974bp) protein (658aa)
universal stress protein UspA n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4FCA4
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_12670_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7095..7763
DNA (669bp) protein (223aa)
radical SAM protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
radical SAM protein id=14626559 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
radical SAM protein
13_2_20cm_scaffold_12670_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7763..10201
DNA (2439bp) protein (813aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=14429058 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_12670_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10198..11010
DNA (813bp) protein (271aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative (Diheme) protein id=4083690 bin=GWA2_Methylomirabilis_73_35 species=endosymbiont of Tevnia jerichonana genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_12670_13
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

11007..12614
DNA (1608bp) protein (536aa)
putative cytochrome c Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Hypothetical (Diheme) protein id=4488143 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative cytochrome c
13_2_20cm_scaffold_12670_14
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

12593..13318
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5F0A6
hypothetical protein Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein
13_2_20cm_scaffold_12670_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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13341..14012
DNA (672bp) protein (224aa)
heme/copper-type cytochrome/quinol oxidases subunit 2 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative cytochrome c oxidase, subunit II id=1881842 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
heme/copper-type cytochrome/quinol oxidases subunit 2
13_2_20cm_scaffold_12670_16
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

Not on your lists

14009..15277
DNA (1269bp) protein (423aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] id=14429800 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
heme/copper-type cytochrome/quinol oxidase, subunit 1
Displaying 16 items

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