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13_2_20cm_scaffold_13521

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_13521_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2..145)
DNA (144bp) protein (48aa)
Tetratricopeptide TPR_2 repeat-containing protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_13521_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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198..749
DNA (552bp) protein (184aa)
Purine phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6H0_GEMAT
purine phosphoribosyltransferase; K07101 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphoribosyltransferase
13_2_20cm_scaffold_13521_3
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

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746..2125
DNA (1380bp) protein (460aa)
Peptidase id=2026683 bin=GWD2_Chloroflexi_49_16 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
peptidase U62 modulator of DNA gyrase; K03568 TldD protein Tax=GWC2_Chloroflexi_49_37_curated
peptidase U62 modulator of DNA gyrase
13_2_20cm_scaffold_13521_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2122..3474
DNA (1353bp) protein (451aa)
peptidase U62 modulator of DNA gyrase; K03592 PmbA protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Peptidase U62, modulator of DNA gyrase id=2037492 bin=GWB2_Chloroflexi_49_20 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
peptidase U62 modulator of DNA gyrase
13_2_20cm_scaffold_13521_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3494..3628)
DNA (135bp) protein (45aa)
4-vinyl reductase 4VR Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_13521_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3634..3996)
DNA (363bp) protein (121aa)
bchJ; bacteriochlorophyll 4-vinyl reductase; K07013 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_13521_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4010..6028)
DNA (2019bp) protein (673aa)
ligA; NAD(+)-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
DNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DNLJ_GEMAT
DNA ligase
13_2_20cm_scaffold_13521_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6025..6756)
DNA (732bp) protein (244aa)
Sensor histidine kinase/response regulator n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D3G7_MYXXD
sensor histidine kinase/response regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
sensor histidine kinase/response regulator
13_2_20cm_scaffold_13521_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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7162..8085
DNA (924bp) protein (308aa)
aminopeptidase P; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI0003631C24
aminopeptidase P, N-terminal domain protein
13_2_20cm_scaffold_13521_10
unknown

Not on your lists

comp(8082..8327)
DNA (246bp) protein (82aa)

This feature has no annotations

13_2_20cm_scaffold_13521_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(8327..8827)
DNA (501bp) protein (167aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Tetratricopeptide TPR_2 repeat protein id=24421351 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
13_2_20cm_scaffold_13521_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8866..10194
DNA (1329bp) protein (443aa)
pdp; pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:BAH37835.1}; EC=2.4.2.2 {ECO:0000313|EMBL:BAH37835.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gem
Pyrimidine-nucleoside phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6H5_GEMAT
13_2_20cm_scaffold_13521_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10010..11287)
DNA (1278bp) protein (426aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6J5_GEMAT
Displaying 13 items

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