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13_2_20cm_scaffold_1565

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1565_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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303..2222
DNA (1920bp) protein (640aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37188.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_2_20cm_scaffold_1565_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2232..4106
DNA (1875bp) protein (625aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37188.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_2_20cm_scaffold_1565_3
unknown

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comp(4144..4692)
DNA (549bp) protein (183aa)

This feature has no annotations

13_2_20cm_scaffold_1565_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4710..5363
DNA (654bp) protein (218aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_1565_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6022..6723
DNA (702bp) protein (234aa)
Polysaccharide deacetylase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJW8_ANASK
Predicted xylanase/chitin deacetylase {ECO:0000313|EMBL:CDM64129.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.
polysaccharide deacetylase
13_2_20cm_scaffold_1565_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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6723..7664
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V0M0_ROSS1
hypothetical protein; K07027 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_2_20cm_scaffold_1565_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(7670..9103)
DNA (1434bp) protein (478aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA-splicing ligase RtcB n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A8L0_PELCD rbh
hypothetical protein
13_2_20cm_scaffold_1565_8
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9108..9497)
DNA (390bp) protein (130aa)
Protein archease id=4628521 bin=GWA2_Deltaproteo_65_63 species=Salinispora arenicola genus=Salinispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
13_2_20cm_scaffold_1565_9
unknown

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9618..9848
DNA (231bp) protein (77aa)

This feature has no annotations

13_2_20cm_scaffold_1565_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(9851..11134)
DNA (1284bp) protein (428aa)
acyltransferase; K00631 glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glycerol-3-phosphate O-acyltransferase id=3398992 bin=GWC2_Proteo_65_14_Ab886 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Acyltransferase family protein associated with ethylmalonyl-CoA pathway
13_2_20cm_scaffold_1565_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12194..12778)
DNA (585bp) protein (195aa)
LemA family protein; K03744 LemA protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein id=2725082 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=unknown taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
LemA family protein
13_2_20cm_scaffold_1565_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12808..13452)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S8_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_1565_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13449..13859)
DNA (411bp) protein (137aa)
PAS/PAC sensor hybrid histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Sensor histidine kinase/response regulator id=2233818 bin=GWB2_Proteobacteria_55_19 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
multi-sensor hybrid histidine kinase
13_2_20cm_scaffold_1565_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13963..15132)
DNA (1170bp) protein (390aa)
Transcriptional regulator, SARP family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ATJ1_STRRD
SARP family transcriptional regulator
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_1565_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15428..15856
DNA (429bp) protein (143aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_1565_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16068..16952)
DNA (885bp) protein (295aa)
NAD-dependent epimerase/dehydratase; K00329 NADH dehydrogenase [EC:1.6.5.3]; K00356 NADH dehydrogenase [EC:1.6.99.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
NAD-dependent epimerase/dehydratase id=2099795 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
oxidoreductase
13_2_20cm_scaffold_1565_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17005..18081)
DNA (1077bp) protein (359aa)
Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T1_GEMAT
two-component response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
response regulator receiver
13_2_20cm_scaffold_1565_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18150..19064)
DNA (915bp) protein (305aa)
Putative periplasmic solute-binding protein n=2 Tax=Singulisphaera acidiphila RepID=L0DMZ9_SINAD rbh
periplasmic solute-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF178
13_2_20cm_scaffold_1565_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19009..19710)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T3_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Double zinc ribbon
13_2_20cm_scaffold_1565_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19838..20107
DNA (270bp) protein (90aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 20 items

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