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13_2_20cm_scaffold_2578

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2578_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

77..460
DNA (384bp) protein (128aa)
RNA-binding S4 domain protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LZ35_HALO1
heat shock protein 15; K04762 ribosome-associated heat shock protein Hsp15 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA-binding S4 domain protein
13_2_20cm_scaffold_2578_2
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(530..1777)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B545DF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ64369.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
13_2_20cm_scaffold_2578_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1774..3051)
DNA (1278bp) protein (426aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJW5_KORVE
amino acid permease
Amino acid permease {ECO:0000313|EMBL:AHG93630.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2578_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3154..3972
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B694D6
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
protein of unknown function DUF4098
13_2_20cm_scaffold_2578_5

Not on your lists

comp(3980..4330)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1G8_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ06427.1}; TaxID=455516 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_009L19.;"
hypothetical protein
13_2_20cm_scaffold_2578_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4372..5025)
DNA (654bp) protein (218aa)
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein LinasL1_09615 id=3960252 bin=GWA2_Methylomirabilis_73_35 species=Sphingopyxis sp. MC1 genus=Sphingopyxis taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_2578_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5040..5858)
DNA (819bp) protein (273aa)
short-chain dehydrogenase n=1 Tax=Schlesneria paludicola RepID=UPI00029AA465
short-chain dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
oxidoreductase
13_2_20cm_scaffold_2578_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5912..7747)
DNA (1836bp) protein (612aa)
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; K00547 homocysteine S-methyltransferase [EC:2.1.1.10] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_cura
Methylenetetrahydrofolate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5U0_GEMAT
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein
13_2_20cm_scaffold_2578_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7975..8802
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJK9_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_2578_10
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8823..10181
DNA (1359bp) protein (453aa)
cytochrome BD ubiquinol oxidase subunit I n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6CDCA
cytochrome bd ubiquinol oxidase subunit I
Cytochrome bd ubiquinol oxidase subunit I {ECO:0000313|EMBL:ACL64348.1}; Flags: Precursor;; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaerom
13_2_20cm_scaffold_2578_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10186..11223
DNA (1038bp) protein (346aa)
qxtB; terminal oxidase subunit II (EC:1.10.3.-)
Probable terminal oxidase subunit II n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B1_SORC5
Cytochrome bd ubiquinol oxidase, subunit II {ECO:0000313|EMBL:EYF02949.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces
13_2_20cm_scaffold_2578_12
unknown

Not on your lists

comp(11253..11405)
DNA (153bp) protein (51aa)

This feature has no annotations

13_2_20cm_scaffold_2578_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11538..12020)
DNA (483bp) protein (161aa)
protein of unknown function YGGT
hypothetical membrane protein; K02221 YggT family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_2578_14
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(12028..12948)
DNA (921bp) protein (307aa)
Kelch repeat-containing protein id=14429662 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Kelch repeat-containing protein Tax=CSP1_5_NC10
Kelch repeat-containing protein
13_2_20cm_scaffold_2578_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12956..14068)
DNA (1113bp) protein (371aa)
2-oxoglutarate dehydrogenase, E1 subunit; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
2-oxoglutarate dehydrogenase E1 n=1 Tax=Patulibacter americanus RepID=UPI0003B58852
2-oxoglutarate dehydrogenase, E1 subunit
13_2_20cm_scaffold_2578_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14197..15330)
DNA (1134bp) protein (378aa)
2-oxoglutarate dehydrogenase, E1 subunit; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
2-oxoglutarate dehydrogenase E1 component n=1 Tax=Patulibacter medicamentivorans RepID=H0E603_9ACTN
2-oxoglutarate dehydrogenase, E1 subunit
13_2_20cm_scaffold_2578_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15311..16420)
DNA (1110bp) protein (370aa)
2-oxoglutarate dehydrogenase, E1 subunit; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCK1_CONWI
2-oxoglutarate dehydrogenase, E1 subunit
13_2_20cm_scaffold_2578_18
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16494..17378
DNA (885bp) protein (295aa)
Beta-lactamase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QP24_9DELT
Beta-lactamase {ECO:0000313|EMBL:EPX58313.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter
beta-lactamase
13_2_20cm_scaffold_2578_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17390..18664)
DNA (1275bp) protein (425aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NG10_ROSCS
regulator of chromosome condensation RCC1 Tax=GWC2_Gemmatimonadetes_71_10_curated
regulator of chromosome condensation, RCC1
13_2_20cm_scaffold_2578_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18998..20296)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W8_GEMAT rbh
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
von Willebrand factor type A
13_2_20cm_scaffold_2578_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

20341..21564
DNA (1224bp) protein (408aa)
Tetracycline resistance protein, class C n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N3N4_9BACT
major facilitator superfamily protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_scaffold_2578_22
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(21671..22768)
DNA (1098bp) protein (366aa)
hypothetical protein
hypothetical protein id=24505317 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Rhodanobacter thiooxydans genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
13_2_20cm_scaffold_2578_23
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(22737..24716)
DNA (1980bp) protein (660aa)
serine/threonine protein kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
protein kinase
Serine/threonine protein kinase id=1250165 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_2_20cm_scaffold_2578_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(24959..25594)
DNA (636bp) protein (212aa)
Cytidylate kinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TD61_9CHLR
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Cytidylate kinase-like family
13_2_20cm_scaffold_2578_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(25598..26515)
DNA (918bp) protein (306aa)
slr1768; hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_scaffold_2578_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(26619..28091)
DNA (1473bp) protein (491aa)
chlI; magnesium chelatase subunit ChlI; K03405 magnesium chelatase subunit I [EC:6.6.1.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Magnesium chelatase subunit ChlI n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5X5_GEMAT
magnesium chelatase subunit ChlI
13_2_20cm_scaffold_2578_27
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(28102..31017)
DNA (2916bp) protein (972aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035CAE18
glycosyl hydrolases 38-like Tax=RBG_16_Planctomycetes_64_12_curated
glycosyl hydrolases 38-like
13_2_20cm_scaffold_2578_28
unknown

Not on your lists

31158..31391
DNA (234bp) protein (78aa)

This feature has no annotations

13_2_20cm_scaffold_2578_29
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(31427..32434)
DNA (1008bp) protein (336aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPZ4_SINAD
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGA30908.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Sin
13_2_20cm_scaffold_2578_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(32431..33069)
DNA (639bp) protein (213aa)
Putative aminomethyl transferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5X8_GEMAT
putative aminomethyl transferase; K06980 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
folate-binding protein YgfZ
Displaying 30 items

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