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13_2_20cm_scaffold_2990

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2990_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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3..2369
DNA (2367bp) protein (789aa)
iron ABC transporter substrate-binding protein n=1 Tax=Bacillus sp. AP8 RepID=UPI0002DC8AF1 rbh
LmbE family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
extracellular solute-binding protein
13_2_20cm_scaffold_2990_2
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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2366..3364
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000381924B
ABC transporter ATP-binding protein; K02052 putative spermidine/putrescine transport system ATP-binding protein Tax=RBG_16_RIF_CHLX_72_14_curated
ABC-type spermidine/putrescine transport systems ATPase component
13_2_20cm_scaffold_2990_3
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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3361..5961
DNA (2601bp) protein (867aa)
ABC superfamily ATP binding cassette transporter permease n=1 Tax=Desmospora sp. 8437 RepID=F5SGB0_9BACL
ABC superfamily ATP binding cassette transporter permease {ECO:0000313|EMBL:EGK11082.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="
iron ABC transporter permease
13_2_20cm_scaffold_2990_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5981..7540
DNA (1560bp) protein (520aa)
Putative phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P3_GEMAT
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:AHG89637.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2990_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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7549..7926
DNA (378bp) protein (126aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_scaffold_2990_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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7923..8867
DNA (945bp) protein (315aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G391_SORC5 id=5224877 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade rbh
ABC transporter ATPase Tax=RBG_16_RIF_WS3X_71_46_curated
ABC transporter ATPase
13_2_20cm_scaffold_2990_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8860..9891
DNA (1032bp) protein (344aa)
integral membrane transport protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative integral membrane transport protein id=1718300 bin=GWB2_Deltaproteobacteria_65_81 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_2_20cm_scaffold_2990_8
GWA2_RIF01_43_8_curated, RIF1, Bacteria

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comp(9893..10321)
DNA (429bp) protein (143aa)
Copper binding protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z2J1_METPS
hypothetical protein Tax=GWA2_RIF01_43_8_curated
copper binding protein
13_2_20cm_scaffold_2990_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(10411..12117)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I3_GEMAT rbh
putative protein kinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative protein kinase
13_2_20cm_scaffold_2990_10
unknown

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12215..12604
DNA (390bp) protein (130aa)

This feature has no annotations

13_2_20cm_scaffold_2990_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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12883..14847
DNA (1965bp) protein (655aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFC5_CHLTF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_2990_12
unknown

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comp(14855..15181)
DNA (327bp) protein (109aa)

This feature has no annotations

13_2_20cm_scaffold_2990_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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15548..16039
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A754_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38064.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_2_20cm_scaffold_2990_14
unknown

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16137..16604
DNA (468bp) protein (156aa)

This feature has no annotations

13_2_20cm_scaffold_2990_15

Not on your lists

16604..17437
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR2_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY89250.1}; TaxID=333371 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC-L1N9.;"
hypothetical protein
13_2_20cm_scaffold_2990_16

Not on your lists

17434..19383
DNA (1950bp) protein (650aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR1_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY89251.1}; TaxID=333371 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC-L1N9.;"
hypothetical protein
Displaying 16 items

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