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13_2_20cm_scaffold_3644

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3644_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..491)
DNA (489bp) protein (163aa)
Gluconate permease gntP n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C503_9PLAN
Gluconate transporter
Gluconate transporter {ECO:0000313|EMBL:AHG89662.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_3644_2
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

627..1478
DNA (852bp) protein (284aa)
Retinol dehydrogenase 12 (All-trans and 9-cis retinol dehydrogenase) n=1 Tax=uncultured bacterium A1Q1_fos_1266 RepID=L7VT34_9BACT
hypothetical protein
Putative oxidoreductase/Short-chain dehydrogenase {ECO:0000313|EMBL:AKF04063.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sanda
13_2_20cm_scaffold_3644_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1487..2410
DNA (924bp) protein (308aa)
Tyrosine recombinase XerC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W1_GEMAT rbh
xerD; tyrosine recombinase XerD; K04763 integrase/recombinase XerD Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Tyrosine recombinase xerC
13_2_20cm_scaffold_3644_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2436..2708
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD18_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_scaffold_3644_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2789..3595
DNA (807bp) protein (269aa)
Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase n=1 Tax=Brevibacillus sp. BC25 RepID=J2PD88_9BACL
glutamine amidotransferase of anthranilate synthase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
pabA; para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II
13_2_20cm_scaffold_3644_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3627..4376
DNA (750bp) protein (250aa)
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=KDSB_GEMAT
3-deoxy-manno-octulosonate cytidylyltransferase
13_2_20cm_scaffold_3644_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4373..6037
DNA (1665bp) protein (555aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
CTP synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V6_GEMAT
CTP synthase
13_2_20cm_scaffold_3644_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

6041..6853
DNA (813bp) protein (271aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] Tax=GWC2_Gemmatimonadetes_71_10_curated
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V5_GEMAT rbh
13_2_20cm_scaffold_3644_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6989..7561
DNA (573bp) protein (191aa)
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45); K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Tax=GWC2_Gemmatimonadetes_71_1
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V4_GEMAT
13_2_20cm_scaffold_3644_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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7530..8504
DNA (975bp) protein (325aa)
kdsD; arabinose 5-phosphate isomerase (EC:5.3.1.13); K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13] Tax=GWC2_Gemmatimonadetes_71_10_curated
Arabinose 5-phosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V3_GEMAT
KpsF/GutQ family protein
13_2_20cm_scaffold_3644_11
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

8669..9088
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V2_GEMAT
hypothetical protein Tax=RBG_16_Acidobacteria_68_9_curated
protein of unknown function DUF1239
13_2_20cm_scaffold_3644_12
unknown

Not on your lists

comp(8923..9261)
DNA (339bp) protein (113aa)

This feature has no annotations

13_2_20cm_scaffold_3644_13
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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9440..10351
DNA (912bp) protein (304aa)
Marine sediment metagenome DNA, contig: S01H1_S04962 Tax=RBG_16_Acidobacteria_68_9_curated
13_2_20cm_scaffold_3644_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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10348..11583
DNA (1236bp) protein (412aa)
putative ABC transporter ATP-binding protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V0_GEMAT
ABC transporter related protein
13_2_20cm_scaffold_3644_15
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

11580..12983
DNA (1404bp) protein (468aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Acidobacteria_68_9_curated
RNA polymerase sigma-54 factor, RpoN
13_2_20cm_scaffold_3644_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12980..13939
DNA (960bp) protein (320aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U8_GEMAT
glycosyl transferase family 2
13_2_20cm_scaffold_3644_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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14023..14550
DNA (528bp) protein (176aa)
hypothetical protein; K07027 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Methyltransferase type 11 id=2867555 bin=GWF2_Planctomycete_41_51 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
methyltransferase type 11
13_2_20cm_scaffold_3644_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14547..15671
DNA (1125bp) protein (375aa)
glycosyltransferase (EC:2.4.-.-) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U7_GEMAT
glycosyl transferase group 1
13_2_20cm_scaffold_3644_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15664..16194
DNA (531bp) protein (177aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U6_GEMAT
hypothetical membrane protein; K07027 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical membrane protein
13_2_20cm_scaffold_3644_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16221..16520
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00037CBAB7
hypothetical membrane protein; K07027 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_scaffold_3644_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

16507..17898
DNA (1392bp) protein (464aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A770_GEMAT
hypothetical membrane protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical membrane protein
13_2_20cm_scaffold_3644_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17870..18796
DNA (927bp) protein (309aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A770_GEMAT
hypothetical membrane protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical membrane protein
13_2_20cm_scaffold_3644_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18789..19511
DNA (723bp) protein (241aa)
putative polyprenol-phosphate mannosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative polyprenol-phosphate mannosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U4_GEMAT
putative polyprenol-phosphate mannosyltransferase
13_2_20cm_scaffold_3644_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19532..20332
DNA (801bp) protein (267aa)
dapE; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Diaminopimelate epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DAPF_GEMAT
Diaminopimelate epimerase
13_2_20cm_scaffold_3644_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20405..21085)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037C084F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_3644_26
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21246..21782)
DNA (537bp) protein (179aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QN48_9DELT
13_2_20cm_scaffold_3644_27
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21919..22662)
DNA (744bp) protein (248aa)
Membrane protein DedA n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5ED53_GEOBB
membrane protein DedA
Membrane protein DedA {ECO:0000313|EMBL:ACH37639.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensi
13_2_20cm_scaffold_3644_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22655..23323)
DNA (669bp) protein (223aa)
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T8_GEMAT
Protein-L-isoaspartate O-methyltransferase
13_2_20cm_scaffold_3644_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23305..24054)
DNA (750bp) protein (250aa)
surE; 5'-nucleotidase SurE (EC:3.1.3.5); K03787 5'-nucleotidase [EC:3.1.3.5] Tax=RBG_16_Gemmatimonadetes_66_8_curated
surE; 5'-nucleotidase SurE (EC:3.1.3.5)
5'-nucleotidase SurE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SURE_GEMAT rbh
13_2_20cm_scaffold_3644_30
Methanobacterium sp. Maddingley MBC34, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(24220..24675)
DNA (456bp) protein (152aa)
glycosyltransferase (EC:2.4.-.-)
Glycosyl transferase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6T435_9EURY
Glycosyl transferase {ECO:0000313|EMBL:EKQ54213.1}; TaxID=1220534 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacteriu
Displaying items 1-30 of 34 in total

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