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13_2_20cm_scaffold_418

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_418_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12..1223)
DNA (1212bp) protein (404aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000058EE3E
alpha amylase catalytic region
13_2_20cm_scaffold_418_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1292..2866)
DNA (1575bp) protein (525aa)
Outer membrane protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZWA3_9BACT
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG91666.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_418_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2880..5867)
DNA (2988bp) protein (996aa)
membrane protein n=1 Tax=Salisaeta longa RepID=UPI0003B38B6B rbh
TonB-dependent outer membrane protein, SusC/RagA
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG91667.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_418_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5976..6236)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J0L990_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_scaffold_418_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6311..7540)
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003712F23
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_scaffold_418_6
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7717..8073
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037C58D1
Uncharacterized protein {ECO:0000313|EMBL:AKF04246.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
YCII-related protein
13_2_20cm_scaffold_418_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8073..9329
DNA (1257bp) protein (419aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZK9_9BACT
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:AKF04245.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaraci
sigma-70 region 2 domain protein
13_2_20cm_scaffold_418_8
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

9377..10501
DNA (1125bp) protein (375aa)
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT04_RUBXD
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter
13_2_20cm_scaffold_418_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10519..10920)
DNA (402bp) protein (134aa)
Sensor histidine kinase/response regulator n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BJK4_DEHSV
PAS/PAC sensor hybrid histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
sensor histidine kinase/response regulator
13_2_20cm_scaffold_418_10
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11073..12047)
DNA (975bp) protein (325aa)
Response regulator receiver protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZT59_DESOH
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator Tax=RBG_13_Deltaproteobacteria_52_11_curated
response regulator receiver protein
13_2_20cm_scaffold_418_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

12234..12746
DNA (513bp) protein (171aa)
DinB family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
DinB family protein
hypothetical protein id=12556803 bin=CNBR_ACIDO species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_2_20cm_scaffold_418_12
Synechococcus sp. PCC 7002, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12743..13240)
DNA (498bp) protein (166aa)
Transcriptional regulator, MarR family n=1 Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=B1XRC0_SYNP2
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACB01105.1}; TaxID=32049 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (st
13_2_20cm_scaffold_418_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13366..14253
DNA (888bp) protein (296aa)
UspA domain-containing protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IXJ3_9EURY
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Universal stress protein family
13_2_20cm_scaffold_418_14
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14272..14715
DNA (444bp) protein (148aa)
Organic hydroperoxide resistance protein ohrA n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3FE12
Organic hydroperoxide resistance protein ohrA
Organic hydroperoxide resistance protein ohrA {ECO:0000313|EMBL:AHD22799.1}; TaxID=1435356 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridi
13_2_20cm_scaffold_418_15
Bacillus vireti, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14799..15296)
DNA (498bp) protein (166aa)
UPI0003D6452F related cluster n=1 Tax=unknown RepID=UPI0003D6452F
Uncharacterized protein {ECO:0000313|EMBL:ETI69405.1}; TaxID=1131730 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus vireti LMG 21834.;"
hypothetical protein
13_2_20cm_scaffold_418_16
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15293..17455)
DNA (2163bp) protein (721aa)
aldehyde dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036CAC3D
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:ERF85174.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhiz
molybdopterin-binding domain of aldehyde dehydrogenase family protein
13_2_20cm_scaffold_418_17
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17452..17907)
DNA (456bp) protein (152aa)
(2Fe-2S)-binding domain protein n=2 Tax=Burkholderia RepID=A4JNR4_BURVG
2Fe-2S iron-sulfur cluster binding domain-containing protein
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ABO57917.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia
13_2_20cm_scaffold_418_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17937..18338)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WCB1_9GAMM
YCII-related protein
YCII-related protein {ECO:0000313|EMBL:AHG88617.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_418_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18545..19948)
DNA (1404bp) protein (468aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Adenylate/guanylate cyclase with TPR repeats id=3866894 bin=GWB1_Deltaproteobacteria_rel_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
protein kinase
13_2_20cm_scaffold_418_20
unknown

Not on your lists

comp(20171..20563)
DNA (393bp) protein (131aa)

This feature has no annotations

13_2_20cm_scaffold_418_21
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(20571..22172)
DNA (1602bp) protein (534aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Putative uncharacterized protein id=4806022 bin=GWC2_Ignavibacteria_56_12 species=Gillisia limnaea genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_2_20cm_scaffold_418_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22355..24691
DNA (2337bp) protein (779aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9E2_GEMAT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93646.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_418_23
uncultured proteobacterium, Proteobacteria, Bacteria

Not on your lists

24809..25195
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI0003783E58
Ferredoxin {ECO:0000313|EMBL:CDL73012.1}; Flags: Fragment;; TaxID=153809 species="Bacteria; Proteobacteria; environmental samples.;" source="uncultured proteobacterium.;"
hypothetical protein
13_2_20cm_scaffold_418_24
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25222..26394
DNA (1173bp) protein (391aa)
Patatin n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHW4_RHOM4
Uncharacterized protein {ECO:0000313|EMBL:ETX02445.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
patatin
13_2_20cm_scaffold_418_25

Not on your lists

26475..27173
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000364F66A
MIP family channel protein {ECO:0000313|EMBL:ADD93474.1}; TaxID=743051 species="Bacteria; environmental samples.;" source="uncultured marine bacterium MedDCM-OCT-S04-C123.;"
glycerol uptake facilitator protein
13_2_20cm_scaffold_418_26
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27170..27460
DNA (291bp) protein (97aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:
glycerol kinase n=1 Tax=Niabella aurantiaca RepID=UPI000380222D
glycerol kinase
13_2_20cm_scaffold_418_27

Not on your lists

27403..28608
DNA (1206bp) protein (402aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:
Glycerol kinase n=1 Tax=uncultured marine bacterium MedDCM-OCT-S04-C123 RepID=D6PCM2_9BACT
glpK; glycerol kinase
13_2_20cm_scaffold_418_28
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

28614..29396
DNA (783bp) protein (261aa)
nagB; glucosamine-6-phosphate deaminase; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6] Tax=RBG_16_Planctomycetes_64_12_curated
Glucosamine-6-phosphate deaminase n=1 Tax=uncultured Rhizobium sp. HF0500_35F13 RepID=E7C615_9RHIZ
glucosamine-6-phosphate isomerase
Displaying 28 items

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