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13_2_20cm_scaffold_4673

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_4673_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(2..730)
DNA (729bp) protein (243aa)
Putative Dioxygenase, ferredoxin subunit, and Flavodoxin (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7G0_9BACT
putative dioxygenase ferredoxin subunit
Putative Dioxygenase, ferredoxin subunit, and Flavodoxin (Modular protein) {ECO:0000313|EMBL:CBK39802.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" sour
13_2_20cm_scaffold_4673_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(840..1517)
DNA (678bp) protein (226aa)
Putative TonB protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A976_GEMAT
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
tonB; putative TonB protein
13_2_20cm_scaffold_4673_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1661..2311
DNA (651bp) protein (217aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
hypothetical protein id=24421162 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Thioalkalivibrio sp. ALE20 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_2_20cm_scaffold_4673_4
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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comp(2308..4143)
DNA (1836bp) protein (612aa)
putative hydrolase; K06978 Tax=RBG_16_Aminicenantes_63_16_curated
Hydrolase CocE/NonD family protein id=4927116 bin=GWA2_Ignavibacteria_55_11 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
putative hydrolase
13_2_20cm_scaffold_4673_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

4387..5160
DNA (774bp) protein (258aa)
Diguanylate cyclase n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4BBB8_TURPD
diguanylate cyclase Tax=RBG_16_Acidobacteria_70_10_curated
diguanylate cyclase
13_2_20cm_scaffold_4673_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(5167..7128)
DNA (1962bp) protein (654aa)
endothelin-converting protein 1 (EC:3.4.24.71); K01415 endothelin-converting enzyme [EC:3.4.24.71] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Endothelin-converting enzyme n=1 Tax=Rhodanobacter denitrificans RepID=M4NC46_9GAMM
pepO; Metallopeptidase PepO, peptidase, M13 family
13_2_20cm_scaffold_4673_7
Caldithrix abyssi, Caldithrix, Bacteria

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7243..8247
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI00036F5A09 rbh
Aldo/keto reductase {ECO:0000313|EMBL:EHO40623.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
NADP-dependent oxidoreductase domain-containing protein
13_2_20cm_scaffold_4673_8
unknown

Not on your lists

8322..9224
DNA (903bp) protein (301aa)

This feature has no annotations

13_2_20cm_scaffold_4673_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9335..9688
DNA (354bp) protein (118aa)
Glyoxalase family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08VV4_STIAD
Glyoxalase-like domain protein
Glyoxalase-like domain protein {ECO:0000313|EMBL:AHG87684.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_4673_10
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(9701..10501)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003664363
hypothetical protein; K01992 ABC-2 type transport system permease protein Tax=RBG_13_Chloroflexi_60_9_curated
multidrug transporter
13_2_20cm_scaffold_4673_11
Geobacillus sp. WSUCF1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10590..11186)
DNA (597bp) protein (199aa)
Integral membrane protein n=1 Tax=Geobacillus sp. WSUCF1 RepID=S7SR53_9BACI
Integral membrane protein {ECO:0000313|EMBL:EPR26645.1}; TaxID=886559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. WSUCF1.;"
hypothetical protein
13_2_20cm_scaffold_4673_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(12328..12774)
DNA (447bp) protein (149aa)
MarR family transcriptional regulator id=12557865 bin=CNBR_ACIDO species=Patulibacter americanus genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
MarR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
MarR family transcriptional regulator
13_2_20cm_scaffold_4673_13
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(12810..13214)
DNA (405bp) protein (135aa)
DoxX family protein id=2885630 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
DoxX family protein Tax=GWA1_Bdellovibrionales_52_35_curated
DoxX family protein
13_2_20cm_scaffold_4673_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(13247..13708)
DNA (462bp) protein (154aa)
MarR family transcriptional regulator id=12557865 bin=CNBR_ACIDO species=Patulibacter americanus genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
MarR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
transcription regulator protein
13_2_20cm_scaffold_4673_15
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13705..13914)
DNA (210bp) protein (70aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DQI6_DESVM
NodT family RND efflux system outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ACL09105.1}; Flags: Precursor;; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desul
Displaying 15 items

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