ggKbase home page

13_2_20cm_scaffold_552

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_552_1
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2..1894)
DNA (1893bp) protein (631aa)
beta-glucosidase (EC:3.2.1.21)
Glycoside hydrolase family 3 protein id=2725679 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
glycoside hydrolase family 3 protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
13_2_20cm_scaffold_552_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2026..4992
DNA (2967bp) protein (989aa)
OmpA-related protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QH43_9DELT
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AHG89209.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_552_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5067..6524
DNA (1458bp) protein (486aa)
UPI00026CBFC3 related cluster n=1 Tax=unknown RepID=UPI00026CBFC3 id=5223543 bin=16ft_combo_ws3_JS1 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Protein of unknown function DUF2329
Uncharacterized protein {ECO:0000313|EMBL:AHG89210.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_552_4
unknown

Not on your lists

comp(6547..7032)
DNA (486bp) protein (162aa)

This feature has no annotations

13_2_20cm_scaffold_552_5
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

7142..7798
DNA (657bp) protein (219aa)
LuxR family two component transcriptional regulator Tax=RBG_16_Zixibacteria_53_22_curated
two-component system response regulator id=717628 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
putative two-component system response regulator
13_2_20cm_scaffold_552_6
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7856..9520
DNA (1665bp) protein (555aa)
Radical SAM domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T982_NIAKG rbh
radical SAM protein Tax=RBG_13_Deltaproteobacteria_52_11_curated
Elongator protein 3/MiaB/NifB
13_2_20cm_scaffold_552_7
unknown

Not on your lists

comp(9517..9882)
DNA (366bp) protein (122aa)

This feature has no annotations

13_2_20cm_scaffold_552_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9970..11826)
DNA (1857bp) protein (619aa)
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter transmembrane region
13_2_20cm_scaffold_552_9
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(11915..13201)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV59_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE85585.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
13_2_20cm_scaffold_552_10
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13476..14234)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI000349030E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAU67685.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Sti
13_2_20cm_scaffold_552_11
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14231..15205)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI000300A21F
transcriptional regulator Tax=RBG_16_Deltaproteobacteria_50_11_curated
hypothetical protein
13_2_20cm_scaffold_552_12
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15359..15814
DNA (456bp) protein (152aa)
Amino acid transporter-like protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HF01_ANADF
amino acid transporter-like protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
amino acid transporter-like protein
13_2_20cm_scaffold_552_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15851..17122
DNA (1272bp) protein (424aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY5_GEMAT
protein of unknown function DUF445
Uncharacterized protein {ECO:0000313|EMBL:AHG91366.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 13 items

View Taxonomy