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13_2_20cm_scaffold_576

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_576_1
unknown

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2..448
DNA (447bp) protein (149aa)

This feature has no annotations

13_2_20cm_scaffold_576_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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445..1122
DNA (678bp) protein (226aa)
lipB; lipoate biosynthesis protein B; Lipoate-protein ligase B (EC:2.3.1.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Octanoyltransferase n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=LIPB_GLOVI
lipB; lipoyltransferase
13_2_20cm_scaffold_576_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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1128..3467
DNA (2340bp) protein (780aa)
penicillin amidase (EC:3.5.1.11)
Penicillin amidase {ECO:0000313|EMBL:ABJ86920.1}; EC=3.5.1.11 {ECO:0000313|EMBL:ABJ86920.1};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacter
Penicillin amidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TV0_SOLUE
13_2_20cm_scaffold_576_4

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3464..4081
DNA (618bp) protein (206aa)
Molybdopterin binding protein n=1 Tax=uncultured bacterium F25-01 RepID=I3VIH3_9BACT
Molybdopterin binding protein {ECO:0000313|EMBL:AFK79179.1}; TaxID=1191433 species="Bacteria; environmental samples.;" source="uncultured bacterium F25-01.;"
oxidoreductase
13_2_20cm_scaffold_576_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4105..5451)
DNA (1347bp) protein (449aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZGV2_TERRK
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
13_2_20cm_scaffold_576_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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5522..6646
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Microchaete sp. PCC 7126 RepID=UPI000347BAB9
TPR-repeat-containing protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_scaffold_576_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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6663..7925
DNA (1263bp) protein (421aa)
glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] id=14625145 bin=bin7_NC10_sister species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
glutamate dehydrogenase
13_2_20cm_scaffold_576_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(7922..9040)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6C0_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
aminopeptidase
13_2_20cm_scaffold_576_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(9028..9753)
DNA (726bp) protein (242aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_576_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9843..11405)
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AR33_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_576_11
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11506..12882)
DNA (1377bp) protein (459aa)
hypothetical protein, partial n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B72EC4
Transporter {ECO:0000313|EMBL:AKF81623.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus
putative transporter
13_2_20cm_scaffold_576_12
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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13060..13569
DNA (510bp) protein (170aa)
phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AU68_RUBXD
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubr
13_2_20cm_scaffold_576_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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13574..17071
DNA (3498bp) protein (1166aa)
dnaE; DNA polymerase III alpha subunit (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA polymerase III alpha subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B9_GEMAT
DNA polymerase III, alpha subunit
13_2_20cm_scaffold_576_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17075..18034
DNA (960bp) protein (320aa)
accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ACCA_GEMAT
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
13_2_20cm_scaffold_576_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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18036..18923
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B7_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
PSP1 domain protein
13_2_20cm_scaffold_576_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


18916..20466
DNA (1551bp) protein (517aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionyl-tRNA synthetase {ECO:0000313|EMBL:BAH37776.1}; EC=6.1.1.10 {ECO:0000313|EMBL:BAH37776.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas
Methionyl-tRNA synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6B6_GEMAT rbh
13_2_20cm_scaffold_576_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

20664..21602
DNA (939bp) protein (313aa)
Membrane protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QN44_9DELT
Metalloendopeptidase-like protein Tax=GWC2_Gemmatimonadetes_71_10_curated
zinc metalloendopeptidase
13_2_20cm_scaffold_576_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21705..22604)
DNA (900bp) protein (300aa)
protein of unknown function DUF4397
Uncharacterized protein {ECO:0000313|EMBL:AHG89283.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_576_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(22601..23077)
DNA (477bp) protein (159aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_scaffold_576_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23089..23433)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6A3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RagB/SusD domain-containing protein
13_2_20cm_scaffold_576_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(23372..24799)
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6A3_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37763.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_2_20cm_scaffold_576_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(24871..25515)
DNA (645bp) protein (215aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6A2_GEMAT
putative outer membrane protein Tax=GWC2_Gemmatimonadetes_71_10_curated
putative outer membrane protein
13_2_20cm_scaffold_576_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25466..28183)
DNA (2718bp) protein (906aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6A2_GEMAT
putative outer membrane protein Tax=GWC2_Gemmatimonadetes_71_10_curated
putative outer membrane protein
13_2_20cm_scaffold_576_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

28562..29332
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC49_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40076.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_2_20cm_scaffold_576_25

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comp(29339..30220)
DNA (882bp) protein (294aa)
WD40-like beta propeller protein n=1 Tax=uncultured bacterium RepID=D5MT79_9BACT
Marine sediment metagenome DNA, contig: S01H4_S01127 {ECO:0000313|EMBL:GAG79429.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_2_20cm_scaffold_576_26
unknown

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30358..30954
DNA (597bp) protein (199aa)

This feature has no annotations

13_2_20cm_scaffold_576_27
unknown

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30967..31419
DNA (453bp) protein (151aa)

This feature has no annotations

13_2_20cm_scaffold_576_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(31479..32477)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9E3_GEMAT
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG89360.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 28 items

View Taxonomy