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13_2_20cm_scaffold_596

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_596_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3..2219
DNA (2217bp) protein (739aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9B1_GEMAT
glycoside hydrolase family 38
Glycoside hydrolase family 38 {ECO:0000313|EMBL:AHG91178.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_596_2
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2219..2884
DNA (666bp) protein (222aa)
esterase n=1 Tax=Salisaeta longa RepID=UPI0003B39BB9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII54108.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
13_2_20cm_scaffold_596_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(2920..3765)
DNA (846bp) protein (282aa)
Putative peptide ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9B0_GEMAT
putative peptide ABC transporter permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC-type transporter, integral membrane subunit
13_2_20cm_scaffold_596_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(3762..4736)
DNA (975bp) protein (325aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QSQ0_CHLT3
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC-type transporter, integral membrane subunit
13_2_20cm_scaffold_596_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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4803..6224
DNA (1422bp) protein (474aa)
Putative peptide ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A8_GEMAT
putative peptide ABC transporter substrate binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC-type transporter, periplasmic subunit
13_2_20cm_scaffold_596_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6221..7234
DNA (1014bp) protein (338aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] Tax=GWC2_Gemmatimonadetes_71_10_curated
GHMP kinase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6FA7D
putative kinase (galactokinase and mevalonate kinase -like protein)
13_2_20cm_scaffold_596_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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7228..10011
DNA (2784bp) protein (928aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A7_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Heparinase II/III family protein
13_2_20cm_scaffold_596_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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10008..10757
DNA (750bp) protein (250aa)
putative methyltransferase; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A6_GEMAT
tRNA/rRNA methyltransferase (SpoU)
13_2_20cm_scaffold_596_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

10717..11889
DNA (1173bp) protein (391aa)
putative aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A5_GEMAT
putative aminotransferase
13_2_20cm_scaffold_596_10
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11897..12802
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI000365EF04
pqqB; coenzyme PQQ synthesis protein B
Coenzyme PQQ synthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653, ECO:0000256|SAAS:SAAS00055095}; Pyrroloquinoline quinone biosynthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653}; TaxID=1042878 spec
13_2_20cm_scaffold_596_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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12810..14288
DNA (1479bp) protein (493aa)
Histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBE69867.1};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylo
Putative Histidine kinase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML25_9BACT
13_2_20cm_scaffold_596_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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14300..15706
DNA (1407bp) protein (469aa)
Putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML24_9BACT
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
Putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator {ECO:0000313|EMBL:CBE69866.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candi
13_2_20cm_scaffold_596_13
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16010..16576
DNA (567bp) protein (189aa)
Pyrroloquinoline-quinone synthase {ECO:0000256|HAMAP-Rule:MF_00654}; EC=1.3.3.11 {ECO:0000256|HAMAP-Rule:MF_00654};; Coenzyme PQQ synthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; Pyrroloquinolin
pyrroloquinoline quinone biosynthesis protein PqqC n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEBFE
pqqC; pyrroloquinoline quinone biosynthesis protein PqqC
13_2_20cm_scaffold_596_14
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16704..16982
DNA (279bp) protein (93aa)
Coenzyme PQQ synthesis protein D n=1 Tax=Thauera sp. 27 RepID=N6XY75_9RHOO
Coenzyme PQQ synthesis protein D {ECO:0000256|HAMAP-Rule:MF_00655}; Pyrroloquinoline quinone biosynthesis protein D {ECO:0000256|HAMAP-Rule:MF_00655}; TaxID=305700 species="Bacteria; Proteobacteria; B
pqqD; pyrroloquinoline quinone biosynthesis protein D
13_2_20cm_scaffold_596_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16972..17928
DNA (957bp) protein (319aa)
Coenzyme PQQ synthesis protein E n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM88_PSEUX
coenzyme PQQ biosynthesis protein E
Coenzyme PQQ synthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; Pyrroloquinoline quinone biosynthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; TaxID=675635 species="Bacteria; Actinobacteria; P
13_2_20cm_scaffold_596_16
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18035..18787
DNA (753bp) protein (251aa)
Daunorubicin resistance ABC transporter ATPase subunit n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2NZ12_STRVO
daunorubicin resistance ABC transporter ATPase subunit
Daunorubicin resistance ABC transporter ATPase subunit {ECO:0000313|EMBL:AEM82906.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Strep
13_2_20cm_scaffold_596_17
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18790..19026
DNA (237bp) protein (79aa)
daunorubicin resistance ABC transporter permease; K09686 antibiotic transport system permease protein Tax=GWB2_Deltaproteobacteria_55_19_curated
13_2_20cm_scaffold_596_18
CSP1_5_NC10, NC10, Bacteria

Not on your lists

18980..19519
DNA (540bp) protein (180aa)
multidrug ABC transporter; K09686 antibiotic transport system permease protein id=14429039 bin=bin3_NC10 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
multidrug ABC transporter; K09686 antibiotic transport system permease protein Tax=CSP1_5_NC10
multidrug ABC transporter
13_2_20cm_scaffold_596_19
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19516..20055)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WG32_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82401.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
13_2_20cm_scaffold_596_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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20385..21185
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A4_GEMAT
amidohydrolase 2
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_scaffold_596_21
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21876..22811
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LDQ8_9BACL
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:KFM95769.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus ma
dihydrodipicolinate synthetase
13_2_20cm_scaffold_596_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22808..23950
DNA (1143bp) protein (381aa)
Sarcosine oxidase (EC:1.5.3.1) Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FCAF7
FAD dependent oxidoreductase
13_2_20cm_scaffold_596_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

23952..25097
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LL98_9BACL
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_scaffold_596_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

25078..26220
DNA (1143bp) protein (381aa)
Mandelate racemase/muconate lactonizing protein; K02549 O-succinylbenzoate synthase [EC:4.2.1.113] Tax=GWC2_Gemmatimonadetes_71_10_curated
Mandelate racemase/muconate lactonizing protein n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CFI0_KOSOT
Mandelate racemase/muconate lactonizing protein
13_2_20cm_scaffold_596_25
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

26217..26771
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024J1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83585.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
Displaying 25 items

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