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13_2_20cm_scaffold_858

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_858_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2..490)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034C0CA3
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_858_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(520..1539)
DNA (1020bp) protein (340aa)
NlpC/P60 family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z3_GEMAT
NlpC/P60 family protein
NlpC/P60 family protein {ECO:0000313|EMBL:BAH37653.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_2_20cm_scaffold_858_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1536..2552)
DNA (1017bp) protein (339aa)
peptidase S58 DmpA Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase S58 DmpA
peptidase S58 DmpA id=24411070 bin=RBG_19FT_COMBO_GAL15_69_19 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
13_2_20cm_scaffold_858_4
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(2719..4635)
DNA (1917bp) protein (639aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Multi-sensor hybrid histidine kinase id=3068375 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-sensor hybrid histidine kinase
13_2_20cm_scaffold_858_5

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comp(4637..5080)
DNA (444bp) protein (148aa)
Response regulator receiver domain protein (CheY) n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJL2_THIDA
Marine sediment metagenome DNA, contig: S01H1_L01648 {ECO:0000313|EMBL:GAF83266.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
response regulator receiver domain-containing protein
13_2_20cm_scaffold_858_6
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

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comp(5109..6536)
DNA (1428bp) protein (476aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctifo
Multi-sensor signal transduction histidine kinase n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J2Z8_NOSP7
multi-sensor signal transduction histidine kinase
13_2_20cm_scaffold_858_7

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comp(6538..7143)
DNA (606bp) protein (202aa)
Putative transmembrane protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYC2_OPITP
Uncharacterized protein {ECO:0000313|EMBL:AIA11042.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transmembrane protein
13_2_20cm_scaffold_858_8

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comp(7131..7529)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DAR5_9BURK
TonB dependent receptor {ECO:0000313|EMBL:AIA11043.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_2_20cm_scaffold_858_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7526..9028)
DNA (1503bp) protein (501aa)
TonB-dependent receptor plug n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIB6_9BACT
TonB-dependent receptor plug {ECO:0000313|EMBL:EEF60377.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Ped
TonB-dependent receptor, plug
13_2_20cm_scaffold_858_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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9375..9989
DNA (615bp) protein (205aa)
two-component response regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
response regulator receiver
dev:DhcVS_565 response regulator receiver:metal-dependent phosphohydrolase, HD subdomain protein id=1241121 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
13_2_20cm_scaffold_858_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(9986..10174)
DNA (189bp) protein (63aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_858_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(10184..11542)
DNA (1359bp) protein (453aa)
acetoacetate metabolism regulatory protein AtoC Tax=RBG_16_Gemmatimonadetes_66_8_curated
Fis family transcriptional regulator id=14430105 bin=bin3_NC10 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
13_2_20cm_scaffold_858_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11535..12482)
DNA (948bp) protein (316aa)
Diacylglycerol kinase catalytic region n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2J2_SPHTD
diacylglycerol kinase catalytic subunit; K07029 Tax=RBG_16_Gemmatimonadetes_66_8_curated
diacylglycerol kinase catalytic subunit
13_2_20cm_scaffold_858_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12485..16894)
DNA (4410bp) protein (1470aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z1_GEMAT rbh
hypothetical protein; K09800 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF490
13_2_20cm_scaffold_858_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16894..19086)
DNA (2193bp) protein (731aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z0_GEMAT
surface antigen; K07277 outer membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
surface antigen (D15)
13_2_20cm_scaffold_858_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19516..21462
DNA (1947bp) protein (649aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y8_GEMAT rbh
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG90077.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_858_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

21428..22507
DNA (1080bp) protein (360aa)
D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Gemmati
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJV1_RHOM4
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase
Displaying 17 items

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