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13_2_20cm_scaffold_3116_19

Organism: 13_2_20CM_Gemmatimonadetes_69_8

partial RP 18 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: comp(15120..15689)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA74_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 178.0
  • Bit_score: 163
  • Evalue 2.20e-37
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 174.0
  • Bit_score: 222
  • Evalue 1.10e-55
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 174.0
  • Bit_score: 222
  • Evalue 5.50e-55

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 570
ATGGCTCAGTCGCTGGGTATACACCACGTGGGGGCGAGCGACGGAGAGCTGGTGCGCCGGGTCCGCGCCGGCGACACCGGTGCGTACACTGCGCTCGTCGCACGCTACCGCGACCGTCTGGGCCGCTACGCCGTGCACATGCTCGGAGATCGCGAAGACGCGGAGGAGGCATTGCAGGACGCCTTCGTTCGCGGGTATCGCTCGCTCGCCCGCTGCGACGATCCGGAGCGGTTCGGCGCGTGGCTGTACGGTATCCTGGTCAACCGGTGCCGGACCGCCGGCGCGCGTGCGGCGCGGCGCGGGCGGCTGTTCGTGCGGGACGACGCGGCCCTCACCCGCGCTCCGCTCCCCAGCCCGGCCGAGCGCGCGGAGTGGGACGACACCGTCCGCCGGGCGCTCGCCCGACTCGCGCCGGAATACCGCGAGGCGTTCCTCCTCAAGCACATCGAGGACCTCGAGTACGACGAAATGGCGCGGCTGACGGGGGCGGGCATCTCGGCGTTGAAGATGCGAGTCAAGCGCGCCCGCGAGCAGCTGCAGCTCATTTTCCGGGAGGCGGAGCGTGTTTGA
PROTEIN sequence
Length: 190
MAQSLGIHHVGASDGELVRRVRAGDTGAYTALVARYRDRLGRYAVHMLGDREDAEEALQDAFVRGYRSLARCDDPERFGAWLYGILVNRCRTAGARAARRGRLFVRDDAALTRAPLPSPAERAEWDDTVRRALARLAPEYREAFLLKHIEDLEYDEMARLTGAGISALKMRVKRAREQLQLIFREAERV*