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13_2_20cm_scaffold_3116

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3116_1
unknown

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2..82
DNA (81bp) protein (27aa)

This feature has no annotations

13_2_20cm_scaffold_3116_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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79..1386
DNA (1308bp) protein (436aa)
Iron-regulated ABC transporter permease protein SufD Tax=GWC2_Gemmatimonadetes_71_10_curated
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD id=14430756 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
sufD; FeS assembly protein SufD
13_2_20cm_scaffold_3116_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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1496..2614
DNA (1119bp) protein (373aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae;
sufS; cysteine desulfurase SufS (EC:2.8.1.7)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00037CFF17
13_2_20cm_scaffold_3116_4
Halobacillus sp. BBL2006, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2595..3038
DNA (444bp) protein (148aa)
NifU family iron-sulfur cluster assembly protein n=1 Tax=Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 / NBRC 102448/ NCIMB 2269) RepID=I0JQ50_HALH3
nifU; NifU family iron-sulfur cluster assembly protein
Nitrogen fixation protein NifU {ECO:0000313|EMBL:KHE72034.1}; TaxID=1543706 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Halobacillus.;" source="Halobacillus sp. BBL2006.;"
13_2_20cm_scaffold_3116_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3098..4060
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BDA7F
putative ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ABC transporter related protein
13_2_20cm_scaffold_3116_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4053..5318
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344BF53
hypothetical membrane protein; K01992 ABC-2 type transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_2_20cm_scaffold_3116_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5437..5814
DNA (378bp) protein (126aa)
S23 ribosomal protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
S23 ribosomal protein id=7201927 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
S23 ribosomal protein
13_2_20cm_scaffold_3116_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5941..7746
DNA (1806bp) protein (602aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J5_GEMAT
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG
13_2_20cm_scaffold_3116_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7881..8714
DNA (834bp) protein (278aa)
Chromosome (Plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PI99_9DELT
parA; chromosome partitioning protein ParA; K03496 chromosome partitioning protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cobyrinic acid ac-diamide synthase
13_2_20cm_scaffold_3116_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8711..9601
DNA (891bp) protein (297aa)
Chromosome partitioning protein ParB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J2_GEMAT
parB; chromosome partitioning protein ParB; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
parB-like partition protein
13_2_20cm_scaffold_3116_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9598..10146
DNA (549bp) protein (183aa)
Cell wall endopeptidase, family M23/M37 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_3116_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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10151..10324
DNA (174bp) protein (58aa)
Putative Peptidase M23B n=1 Tax=Clostridium ultunense Esp RepID=M1ZBL2_9CLOT
peptidase M23 Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M23
13_2_20cm_scaffold_3116_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10326..10736
DNA (411bp) protein (137aa)
Cell shape determination protein CcmA n=1 Tax=uncultured bacterium RepID=K1YVZ2_9BACT
Integral membrane protein CcmA involved in cell shape determination Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Integral membrane protein CcmA involved in cell shape determination
13_2_20cm_scaffold_3116_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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10835..11647
DNA (813bp) protein (271aa)
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVR2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
NGG1p interacting factor 3 protein, NIF3
13_2_20cm_scaffold_3116_15
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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11644..12849
DNA (1206bp) protein (402aa)
major facilitator transporter id=24472761 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
major facilitator transporter Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
major facilitator superfamily protein
13_2_20cm_scaffold_3116_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(12846..13988)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Z1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92075.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_3116_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(14001..14636)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA76_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92076.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_3116_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(14639..15127)
DNA (489bp) protein (163aa)
Putative Glycosyl hydrolase, family 13 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDN4_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glycoside hydrolase family 13 domain protein
13_2_20cm_scaffold_3116_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(15120..15689)
DNA (570bp) protein (190aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA74_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_3116_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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15777..17192
DNA (1416bp) protein (472aa)
Ig domain protein, group 2 domain protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CUU3_METMJ
Ig domain protein group 2 domain protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:AHG91641.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_3116_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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17262..18245
DNA (984bp) protein (328aa)
Metallo hydrolase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUV3_9BACT rbh
Zn-dependent hydrolase
Zn-dependent hydrolase {ECO:0000313|EMBL:AHG88047.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_3116_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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18321..19793
DNA (1473bp) protein (491aa)
Peptidase M20 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHQ0_KORVE
peptidase M20 Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M20
13_2_20cm_scaffold_3116_23
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

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19790..20449
DNA (660bp) protein (220aa)
putative phosphohydrolase; K07098 id=15193185 bin=GWC2_NOV_55_46 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_NOV_55_46 organism_group=Proteobacteria
yaeI4; serine/threonine protein phosphatase
Tax=BJP_IG2102_BRC1_58_13
Displaying 23 items

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