ggKbase home page

13_2_20cm_scaffold_4016_9

Organism: 13_2_20CM_Gemmatimonadetes_69_8

partial RP 18 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: 8689..9582

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y4_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 296.0
  • Bit_score: 465
  • Evalue 3.20e-128
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 297.0
  • Bit_score: 527
  • Evalue 1.60e-146
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 296.0
  • Bit_score: 465
  • Evalue 9.00e-129

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 894
ATGGCGCGGTCGAACGGAGGCAAGGCCAAGGCGTTCTTTCGAGCCAATCCTTCCGGAGCCTTCGACCAGTATCTGCAAGACATCCAAAAGCTACCCCTCATCAAAGACCCCGCAGAAGAGCGCCGGCTCGCACGCCGGGTGCAGCGGGGCGATGAAAAAGCCGCCGAACGACTCGTCACCGCCAACCTCCGCTTCGTCATCTCCTACGTCAAGAAGTACCAGGGTCACGGCCTCGACCTGTCGGAGCTGGTGGCGATCGGCAACGAGGGGCTGCTCAAAGCAGTCAAGAAGTTCGATCCCGACCAGGGCGTGAAGTTCATCTCGTACGCGGTGTGGTGGGTCCGCCAGGCGGTGTTGAAGGCGCTGGCGGAGCAGACGCGCAGCGTGCGGATCCCGCTGAATCAGAACTCGCAGCTGATCCGCATGAGCCGCACCGAGACATACCTCTCCCAAGAGCTCGGCCGCGAACCCACCGACGACGAAATCGCGCTCGCTCTCGAAGACACGGTAGAAAATGTCCGCACCGCGCGCCGCATGACGGCGGCGGAGCTGTCGCTCGACGCGCCCGTGGATCGCACCGACAAGGACGCGGCGACGCTGGGCGAGCGGTTTGCCGGCCAGGAAGGCGGCGAGATCGAGGAGAAGACGGACGGCAAGCTGATGCGCGAGTTCATCGACCGCATCTTCCAGAAGTACCTGACGCCGCGCGAGCGCAAGATTCTCTACCTCTATTACGGCCTCGAGGAAGGCAGCGAGGCGATGACGCTCGAGAAGATCGGCGCGCTGATGGGCGTCACGCGGGAACGGATCAGGCAGATACGGGAACGGGCATTCGAAAAGCTGCGGGAGTCGCCGGACGGAAGGGCTTTGAGGGGCTTCTGGAGAGCCGCCTGA
PROTEIN sequence
Length: 298
MARSNGGKAKAFFRANPSGAFDQYLQDIQKLPLIKDPAEERRLARRVQRGDEKAAERLVTANLRFVISYVKKYQGHGLDLSELVAIGNEGLLKAVKKFDPDQGVKFISYAVWWVRQAVLKALAEQTRSVRIPLNQNSQLIRMSRTETYLSQELGREPTDDEIALALEDTVENVRTARRMTAAELSLDAPVDRTDKDAATLGERFAGQEGGEIEEKTDGKLMREFIDRIFQKYLTPRERKILYLYYGLEEGSEAMTLEKIGALMGVTRERIRQIRERAFEKLRESPDGRALRGFWRAA*