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13_2_20cm_scaffold_4016

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_4016_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(3..1442)
DNA (1440bp) protein (480aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z0_GEMAT
surface antigen; K07277 outer membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
surface antigen (D15)
13_2_20cm_scaffold_4016_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1922..2956
DNA (1035bp) protein (345aa)
Putative ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y9_GEMAT
ABC-type transporter, periplasmic subunit
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AHG90078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_4016_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2956..3873
DNA (918bp) protein (306aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y8_GEMAT
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG90077.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_4016_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4066..5256
DNA (1191bp) protein (397aa)
D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Gemmati
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG19_RHOMR
13_2_20cm_scaffold_4016_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(5317..6339)
DNA (1023bp) protein (341aa)
putative oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
Ferredoxin--NADP reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y7_GEMAT
putative oxidoreductase
13_2_20cm_scaffold_4016_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6475..7026
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y6_GEMAT
ATP/cobalamin adenosyltransferase
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:AHG90070.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_4016_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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7020..8135
DNA (1116bp) protein (372aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-dehydroquinate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y5_GEMAT
3-dehydroquinate synthase
13_2_20cm_scaffold_4016_8
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(8175..8405)
DNA (231bp) protein (77aa)
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
13_2_20cm_scaffold_4016_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8689..9582
DNA (894bp) protein (298aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y4_GEMAT
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor
13_2_20cm_scaffold_4016_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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9724..10410
DNA (687bp) protein (229aa)
Peptidase S16, lon domain protein {ECO:0000313|EMBL:CDM66852.1}; EC=3.4.21.53 {ECO:0000313|EMBL:CDM66852.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;"
ATP-dependent protease La n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFU6_9BACT
peptidase S16 lon domain protein
13_2_20cm_scaffold_4016_11
RIFOXYA2_FULL_Elusimicrobia_69_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10790..11176)
DNA (387bp) protein (129aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_69_6_curated
13_2_20cm_scaffold_4016_12
unknown

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comp(11210..11398)
DNA (189bp) protein (63aa)

This feature has no annotations

13_2_20cm_scaffold_4016_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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12726..12992
DNA (267bp) protein (89aa)
glcE; glycolate oxidase subunit Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_4016_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13002..14261
DNA (1260bp) protein (420aa)
Glycolate oxidase iron-sulfur subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y0_GEMAT
glcF; glycolate oxidase iron-sulfur subunit
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas auran
13_2_20cm_scaffold_4016_15
unknown

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14268..14375
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 15 items

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