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13_2_20cm_scaffold_464_4

Organism: 13_2_20CM_Gemmatimonadetes_69_8

partial RP 18 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: comp(2784..3344)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 169.0
  • Bit_score: 135
  • Evalue 4.70e-29
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 154.0
  • Bit_score: 173
  • Evalue 2.20e-40
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 161.0
  • Bit_score: 143
  • Evalue 6.40e-32

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 561
GTGAGCCCAGAGGATCTGGCCGACGTCTACCGCACCACGTACCACGCGCTCGTGCGGTTTCTGTACCGCAAGGTGTGGGACGCCGAGCGCGCGGAGGACCTGGCTCAGGAGGCGTTTGCCCGAGCGCTGGTCCACAAGCCGGCCAACGCGCGTGGCTGGCTGTTCGTGGTGGCGGCGAACATGGCGCGCGACGATGCGCGCCGCGCGGCGCGCGAGCGGCGCCACCTCACGCTCCTGACGAGCGAGCCGGCAAGCGCCCCGCCGTCCGACGAGGCGGTACACACCGAGAGCGAGCGCGCCAGTGTGCGCGCCGCGCTCGAGCAGCTCACGCCGCGCGACCGCGAGGTGTTGCTCTTGTGGGACTCGGGGCTGTCGTACGACGAGATCGCGTCTCAGACGGGCCTGGCGCGCGGCGCCATCGGCACGACCCTCGCTCGGGCGCGCCGCCGGCTGGTGGAAGCGTTCGAGGCGGGAAAGGCGGGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCGAGGAGGAGCGGGCGCTCATCGCACGGGCTGA
PROTEIN sequence
Length: 187
VSPEDLADVYRTTYHALVRFLYRKVWDAERAEDLAQEAFARALVHKPANARGWLFVVAANMARDDARRAARERRHLTLLTSEPASAPPSDEAVHTESERASVRAALEQLTPRDREVLLLWDSGLSYDEIASQTGLARGAIGTTLARARRRLVEAFEAGKAGXXXXXXXXXXXXXXPRGGAGAHRTG*