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13_2_20cm_scaffold_464

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_464_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1..1146
DNA (1146bp) protein (382aa)
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical membrane protein id=24582159 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
13_2_20cm_scaffold_464_2
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

1289..1681
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MP26_9ACTO
blue (type 1) copper domain protein Tax=GWC1_Treponema_61_84_curated
13_2_20cm_scaffold_464_3
unknown

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comp(1832..2710)
DNA (879bp) protein (293aa)

This feature has no annotations

13_2_20cm_scaffold_464_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2784..3344)
DNA (561bp) protein (187aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor, sigma-70 family
13_2_20cm_scaffold_464_5
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(3416..5434)
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I866_CALAS
hypothetical protein; K07114 uncharacterized protein Tax=CG_Anaero_02
hypothetical protein
13_2_20cm_scaffold_464_6
unknown

Not on your lists

5607..5939
DNA (333bp) protein (111aa)

This feature has no annotations

13_2_20cm_scaffold_464_7
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5959..6249)
DNA (291bp) protein (97aa)
Putative metallo-beta-lactamase family protein n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DRD0_9BACL
Putative metallo-beta-lactamase family protein {ECO:0000313|EMBL:EED07402.1}; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclo
hypothetical protein
13_2_20cm_scaffold_464_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6194..7045)
DNA (852bp) protein (284aa)
Rhodanese domain protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SM47_THEM7
rhodanese-like domain protein
rhodanese-like protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
13_2_20cm_scaffold_464_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7184..7666
DNA (483bp) protein (161aa)
Blue-copper protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M3_GEMAT
blue (type 1) copper domain protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:AHG88813.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_464_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7776..10571
DNA (2796bp) protein (932aa)
Putative Serine/threonine protein kinase PrkC regulator of stationary phase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z0X8_9ACTN
protein kinase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_464_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10556..11179
DNA (624bp) protein (208aa)
Transcriptional regulator, SARP family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y986_MESOW
transcriptional activator domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
SARP family transcriptional regulator
13_2_20cm_scaffold_464_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11160..12383
DNA (1224bp) protein (408aa)
LuxR family transcriptional regulator fused with ATPase domain (Fragment) n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1IBC2_9PSEU
transcriptional activator domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
LuxR family transcriptional regulator fused with ATPase domain
13_2_20cm_scaffold_464_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12499..13545
DNA (1047bp) protein (349aa)
polyphosphate kinase (EC:2.7.4.1) Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PA99_9SPHN
hypothetical protein
13_2_20cm_scaffold_464_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13559..16144
DNA (2586bp) protein (862aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGR4_ANADF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_464_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16156..19380
DNA (3225bp) protein (1075aa)
polyphosphate kinase (EC:2.7.4.1) Tax=RBG_16_Gemmatimonadetes_66_8_curated
ppk; polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JRZ3_SYNJA
13_2_20cm_scaffold_464_16
unknown

Not on your lists

19538..19990
DNA (453bp) protein (151aa)

This feature has no annotations

13_2_20cm_scaffold_464_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19969..22743)
DNA (2775bp) protein (925aa)
Serine/threonine protein kinase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GH84_9DELT
serine/threonine protein kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
protein kinase
13_2_20cm_scaffold_464_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22804..24702
DNA (1899bp) protein (633aa)
Transcriptional activator domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTM4_PSEUX
transcriptional activator domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcriptional activator domain-containing protein
13_2_20cm_scaffold_464_19
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

24758..25216
DNA (459bp) protein (153aa)
Tax=BJP_IG2069_Spirochaetales_48_31
13_2_20cm_scaffold_464_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

25213..25722
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B657B1
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_scaffold_464_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

25726..26574
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A779_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_464_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

26635..27714
DNA (1080bp) protein (360aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_464_23
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

27767..28390
DNA (624bp) protein (208aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Putative HAD-superfamily hydrolase, subfamily IA, variant 3 id=3804655 bin=GWA2_Elusimicrobia_66_18 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
HAD family hydrolase
13_2_20cm_scaffold_464_24
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

28392..29924
DNA (1533bp) protein (511aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LME9_SYNFM
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
hypothetical protein
13_2_20cm_scaffold_464_25

Not on your lists

29921..30475
DNA (555bp) protein (185aa)
aminotransferase (EC:2.6.1.-)
Marine sediment metagenome DNA, contig: S01H1_S39530 {ECO:0000313|EMBL:GAG47550.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Aminotransferase id=3804648 bin=GWA2_Elusimicrobia_66_18 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Displaying 25 items

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