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13_2_20cm_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_42_1
unknown

Not on your lists

comp(2..88)
DNA (87bp) protein (29aa)

This feature has no annotations

13_2_20cm_scaffold_42_2
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(361..2088)
DNA (1728bp) protein (576aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000376EF43
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein
13_2_20cm_scaffold_42_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2279..3364
DNA (1086bp) protein (362aa)
amidohydrolase 2; K03392 aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45] Tax=GWA2_Rokubacteria_70_23_curated
Amidohydrolase 2 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5N1_SPHTD
amidohydrolase 2
13_2_20cm_scaffold_42_4
unknown

Not on your lists

comp(3774..3914)
DNA (141bp) protein (47aa)

This feature has no annotations

13_2_20cm_scaffold_42_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4174..5076)
DNA (903bp) protein (301aa)
Putative amidohydrolase (Isochorismatase) {ECO:0000313|EMBL:CCV04412.1}; EC=3.3.2.1 {ECO:0000313|EMBL:CCV04412.1};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; P
amidohydrolase (isochorismatase) (EC:3.3.2.1)
Putative amidohydrolase (Isochorismatase) n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EJ79_9RHIZ
13_2_20cm_scaffold_42_6
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5460..6287)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000380B6C9 rbh
Putative Phosphoethanolamine N-methyltransferase 1 {ECO:0000313|EMBL:EPJ39813.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptom
methyltransferase
13_2_20cm_scaffold_42_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(6344..7741)
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003779830 rbh
transmembrane transport protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
transmembrane transport protein
13_2_20cm_scaffold_42_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7835..8746
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000370413A rbh
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU47469.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov
13_2_20cm_scaffold_42_9
unknown

Not on your lists

8851..9027
DNA (177bp) protein (59aa)

This feature has no annotations

13_2_20cm_scaffold_42_10
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8993..9592
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035E16AE
Uncharacterized protein {ECO:0000313|EMBL:KJC59691.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
hypothetical protein
13_2_20cm_scaffold_42_11
unknown

Not on your lists

comp(9520..9816)
DNA (297bp) protein (99aa)

This feature has no annotations

13_2_20cm_scaffold_42_12
unknown

Not on your lists

comp(10027..10233)
DNA (207bp) protein (69aa)

This feature has no annotations

13_2_20cm_scaffold_42_13
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

10271..12448
DNA (2178bp) protein (726aa)
Transcriptional regulator, NifA subfamily, Fis Family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026M7_SOLUE rbh
Fis family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Fis family transcriptional regulator
13_2_20cm_scaffold_42_14
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

12686..13204
DNA (519bp) protein (173aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP82_KORVE
anti-sigma regulatory factor, serine/threonine protein kinase Tax=RBG_13_Acidobacteria_68_16_curated
anti-sigma regulatory factor, serine/threonine protein kinase
13_2_20cm_scaffold_42_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

13214..14080
DNA (867bp) protein (289aa)
TonB family protein; K03832 periplasmic protein TonB Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
TonB-like protein; K03832 periplasmic protein TonB id=24433698 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
TonB family protein
13_2_20cm_scaffold_42_16
unknown

Not on your lists

14105..14653
DNA (549bp) protein (183aa)

This feature has no annotations

13_2_20cm_scaffold_42_17
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14650..15555
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E73A5
Universal stress protein UspA and related nucleotide-binding proteins Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
Universal stress protein UspA and related nucleotide-binding proteins
13_2_20cm_scaffold_42_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15654..16373
DNA (720bp) protein (240aa)
RNA polymerase sigma factor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN56_KORVE
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_2_20cm_scaffold_42_19
unknown

Not on your lists

comp(16282..16512)
DNA (231bp) protein (77aa)

This feature has no annotations

13_2_20cm_scaffold_42_20
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

16659..16916
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NU53_GRAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU38688.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC B
13_2_20cm_scaffold_42_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

16900..18657
DNA (1758bp) protein (586aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035CC200
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84756.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_2_20cm_scaffold_42_22
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

18720..19103
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037EFAA5
hypothetical protein Tax=RBG_13_Planctomycetes_62_9_curated
permease
13_2_20cm_scaffold_42_23
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

19110..20177
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B637EA
hypothetical protein
Glr1418 protein {ECO:0000313|EMBL:BAC89359.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_2_20cm_scaffold_42_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(20346..20936)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIK7_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43293.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_2_20cm_scaffold_42_25
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(21641..22456)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035C7E84
Uncharacterized protein {ECO:0000313|EMBL:KIF29201.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
Serine/threonine protein kinase-related protein
13_2_20cm_scaffold_42_26
Dictyostelium fasciculatum, Dictyostelium, Dictyosteliida, Eukaryota

Not on your lists

22825..23187
DNA (363bp) protein (121aa)
Cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Putative uncharacterized protein n=1 Tax=Dictyostelium fasciculatum (strain SH3) RepID=F4Q8J9_DICFS
Putative uncharacterized protein {ECO:0000313|EMBL:EGG16099.1}; TaxID=1054147 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium fasciculatum (strain SH3)
13_2_20cm_scaffold_42_27
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

23231..24100
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQY4_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40716.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_2_20cm_scaffold_42_28
unknown

Not on your lists

24313..24456
DNA (144bp) protein (48aa)

This feature has no annotations

13_2_20cm_scaffold_42_29
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(24545..25678)
DNA (1134bp) protein (378aa)
Putative NHL repeat protein n=1 Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1G4_9ZZZZ rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_2_20cm_scaffold_42_30
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

26039..27265
DNA (1227bp) protein (409aa)
acyl-CoA dehydrogenase (EC:1.3.99.3); K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
acyl-CoA dehydrogenase (EC:1.3.99.3)
acyl-CoA dehydrogenase n=1 Tax=Schlesneria paludicola RepID=UPI00029ABD4D rbh
Displaying items 1-30 of 52 in total

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