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13_2_20cm_scaffold_44

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_44_1
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(120..464)
DNA (345bp) protein (115aa)
type II secretion system pseudopilin OxpG n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B34D2F
general secretion pathway protein G; K02456 general secretion pathway protein G Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
general secretion pathway protein G
13_2_20cm_scaffold_44_2
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(585..1085)
DNA (501bp) protein (167aa)
General secretion pathway protein G n=1 Tax=mine drainage metagenome RepID=E6QIQ3_9ZZZZ
general secretion pathway protein G; K02456 general secretion pathway protein G Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
prepilin-type N-terminal cleavage/methylation domain-containing protein
13_2_20cm_scaffold_44_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1103..3376)
DNA (2274bp) protein (758aa)
Type II and III secretion system protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ52_KORVE
type II and III secretion system protein
Type II and III secretion system protein {ECO:0000313|EMBL:ABF40998.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;"
13_2_20cm_scaffold_44_4
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3533..4030
DNA (498bp) protein (166aa)
SsrA-binding protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4B8_ACIC5
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Aci
13_2_20cm_scaffold_44_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

4037..5527
DNA (1491bp) protein (497aa)
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; EC=3.4.11.1 {ECO:0000255|HAMAP-Rule:MF_00181};; Leucine aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; Short=LAP {ECO:0000255|HAMA
Probable cytosol aminopeptidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=AMPA_SOLUE
13_2_20cm_scaffold_44_6
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5600..7621)
DNA (2022bp) protein (674aa)
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000360B9EF
arginyl-tRNA synthetase
13_2_20cm_scaffold_44_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

7909..9096
DNA (1188bp) protein (396aa)
hypothetical protein; K09121 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein; K09121 hypothetical protein id=14428956 bin=bin3_NC10 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_44_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


9099..11087
DNA (1989bp) protein (663aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ19_KORVE
methionyl-tRNA synthetase
13_2_20cm_scaffold_44_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

11137..11949
DNA (813bp) protein (271aa)
TatD-related deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
TatD-related deoxyribonuclease n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ20_KORVE
TatD-related deoxyribonuclease
13_2_20cm_scaffold_44_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

12040..12954
DNA (915bp) protein (305aa)
geranyltranstransferase (EC:2.5.1.10); K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Polyprenyl synthetase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UZZ3_TERSS
polyprenyl synthetase
13_2_20cm_scaffold_44_11
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

12996..13952
DNA (957bp) protein (319aa)
Histone deacetylase superfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A43_SOLUE
histone deacetylase superfamily protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
histone deacetylase superfamily protein
13_2_20cm_scaffold_44_12
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

14002..14934
DNA (933bp) protein (311aa)
dppA; D-aminopeptidase (EC:3.4.11.-); K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
dppA; D-aminopeptidase (EC:3.4.11.-)
D-aminopeptidase id=5009202 bin=GWA2_Ignavibacteria_55_11 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome rbh
13_2_20cm_scaffold_44_13
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(14941..16341)
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036F51BA
AhpC/TSA family protein Tax=GWA2_Ignavibacteria_54_16_curated
redoxin
13_2_20cm_scaffold_44_14
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16404..17384)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WXN8_ACISM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW68654.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tund
13_2_20cm_scaffold_44_15
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(17452..18378)
DNA (927bp) protein (309aa)
ExsB family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZH4_SOLUE
exoenzyme S synthesis protein B; K06864 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
exoenzyme S synthesis protein B
13_2_20cm_scaffold_44_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(18403..19710)
DNA (1308bp) protein (436aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
outer membrane protein; K07277 outer membrane protein id=12554247 bin=CNBR_ACIDO species=Rhodopirellula sallentina genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_2_20cm_scaffold_44_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(19741..21606)
DNA (1866bp) protein (622aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q56_SOLUE
13_2_20cm_scaffold_44_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(21690..21911)
DNA (222bp) protein (74aa)
phosphoribosylformylglycinamidine synthetase PurS; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Phosphoribosylformylglycinamidine synthetase PurS n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISZ9_KORVE
phosphoribosylformylglycinamidine synthase subunit PurS
13_2_20cm_scaffold_44_19
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(21963..22904)
DNA (942bp) protein (314aa)
adenosine deaminase; K01488 adenosine deaminase [EC:3.5.4.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
add; adenosine deaminase (EC:3.5.4.4)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036745EF
13_2_20cm_scaffold_44_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(22970..23827)
DNA (858bp) protein (286aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein id=14430002 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_44_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(23840..25348)
DNA (1509bp) protein (503aa)
Amino acid permease-associated region n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029V7_SOLUE rbh
amino acid permease
Amino acid permease-associated region {ECO:0000313|EMBL:ABJ82169.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soli
13_2_20cm_scaffold_44_22
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(25487..27676)
DNA (2190bp) protein (730aa)
ATP-dependent DNA helicase Rep; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
ATP-dependent DNA helicase, Rep family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029V8_SOLUE
ATP-dependent DNA helicase Rep
13_2_20cm_scaffold_44_23
unknown

Not on your lists

27744..27980
DNA (237bp) protein (79aa)

This feature has no annotations

13_2_20cm_scaffold_44_24
unknown

Not on your lists

comp(27879..28544)
DNA (666bp) protein (222aa)

This feature has no annotations

13_2_20cm_scaffold_44_25
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

28640..30013
DNA (1374bp) protein (458aa)
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Three-deoxy-D-manno-octulosonic-acid transferase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHD3_KORVE
3-deoxy-D-manno-octulosonic-acid transferase
13_2_20cm_scaffold_44_26
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

30010..31017
DNA (1008bp) protein (336aa)
lpxK; Tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) (EC:2.7.1.130) Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
tetraacyldisaccharide 4''-kinase id=3442508 bin=GWF2_Planctomycetes_50_10 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
13_2_20cm_scaffold_44_27
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

31059..32060
DNA (1002bp) protein (334aa)
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Lipopolysaccharide heptosyltransferase II n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SR3_SOLUE
lipopolysaccharide heptosyltransferase II
13_2_20cm_scaffold_44_28
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32053..32622
DNA (570bp) protein (190aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobac
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NC24_DESAR
histidinol-phosphate phosphatase
13_2_20cm_scaffold_44_29
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

32619..33674
DNA (1056bp) protein (352aa)
hldE; D-beta-D-heptose 7-phosphate kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PfkB domain protein id=4143312 bin=GWF2_Methylomirabilis_70_14 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribokinase-like domain-containing protein
13_2_20cm_scaffold_44_30
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

33678..34169
DNA (492bp) protein (164aa)
cytidyltransferase-related domain-containing protein id=12555681 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Cytidyltransferase-related enzyme {ECO:0000313|EMBL:CDM65984.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cytidyltransferase-related domain-containing protein
Displaying items 1-30 of 38 in total

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