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13_2_20cm_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_56_1
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124..378)
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KFA94174.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
13_2_20cm_scaffold_56_2
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(425..985)
DNA (561bp) protein (187aa)
Putative hydrolase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDU5_9DELT
Putative hydrolase {ECO:0000313|EMBL:EDM75984.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocysti
Zn-dependent hydrolase
13_2_20cm_scaffold_56_3

Not on your lists

1118..2242
DNA (1125bp) protein (375aa)
Small GTP-binding protein n=1 Tax=mine drainage metagenome RepID=E6QK43_9ZZZZ
Small GTP-binding protein {ECO:0000313|EMBL:CBI07610.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
obgE; GTPase ObgE
13_2_20cm_scaffold_56_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

2276..2995
DNA (720bp) protein (240aa)
nicotinate-nucleotide adenylyltransferase; K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVS4_KORVE
nicotinate-nucleotide adenylyltransferase
13_2_20cm_scaffold_56_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

2992..3459
DNA (468bp) protein (156aa)
Ribosomal silencing factor RsfS n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVS3_KORVE
Iojap-related protein; K09710 ribosome-associated protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Iojap-related protein
13_2_20cm_scaffold_56_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3456..4424
DNA (969bp) protein (323aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVS2_KORVE rbh
Fis family transcriptional regulator
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ABF39028.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" sourc
13_2_20cm_scaffold_56_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

4497..4925
DNA (429bp) protein (143aa)
rlmH; ribosomal RNA large subunit methyltransferase H (EC:2.1.1.-) Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G4B6_9DELT
hypothetical protein
13_2_20cm_scaffold_56_8
unknown

Not on your lists

4953..5399
DNA (447bp) protein (149aa)

This feature has no annotations

13_2_20cm_scaffold_56_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5454..5990
DNA (537bp) protein (179aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:ABF43702.1}; EC=2.5.1.17 {ECO:0000313|EMBL:ABF43702.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacte
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHE8_KORVE
cob(I)yrinic acid a,c-diamide adenosyltransferase
13_2_20cm_scaffold_56_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6128..6976
DNA (849bp) protein (283aa)
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
acetyl-CoA carboxylase subunit beta n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B336FE
acetyl-CoA carboxylase, carboxyl transferase subunit beta
13_2_20cm_scaffold_56_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6978..8321
DNA (1344bp) protein (448aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037D7EAD rbh
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
13_2_20cm_scaffold_56_12
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8388..8948
DNA (561bp) protein (187aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PR16_MEIRD
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
13_2_20cm_scaffold_56_13
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

8945..10087
DNA (1143bp) protein (381aa)
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NMN9_MARHT rbh
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
13_2_20cm_scaffold_56_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10463..11800
DNA (1338bp) protein (446aa)
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Amidohydrolase id=4817215 bin=GWC2_Ignavibacteria_56_12 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
amidohydrolase
13_2_20cm_scaffold_56_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

11871..12305
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036DBD29
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_2_20cm_scaffold_56_16
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12318..13112)
DNA (795bp) protein (265aa)
Uncharacterized oxidoreductase yvaG {ECO:0000313|EMBL:CBN57621.1}; EC=1.-.-.- {ECO:0000313|EMBL:CBN57621.1};; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kam
3-hydroxybutyrate dehydrogenase (EC:1.1.1.30)
Uncharacterized oxidoreductase yvaG n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G4T1_9CYAN
13_2_20cm_scaffold_56_17
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(13146..14117)
DNA (972bp) protein (324aa)
yhdN1; aldo/keto reductase family oxidoreductase Tax=GWC2_Nitrospirae_57_9_curated
yhdN1; aldo/keto reductase family oxidoreductase
Aldo/keto reductase family oxidoreductase id=2263104 bin=GWB2_Chloroflexi_49_20 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
13_2_20cm_scaffold_56_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(14412..14855)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037FAB4F
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Integral membrane protein CcmA involved in cell shape determination
13_2_20cm_scaffold_56_19
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15170..16375)
DNA (1206bp) protein (402aa)
Biotin carboxylase id=3094895 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
biotin carboxylase Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
ATP-dependent carboxylate-amine ligase domain-containing protein
13_2_20cm_scaffold_56_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(16411..17193)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003739F65
esterase
Putative esterase {ECO:0000313|EMBL:ABJ84901.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (str
13_2_20cm_scaffold_56_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(17190..20648)
DNA (3459bp) protein (1153aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candida
pyruvate carboxylase (EC:6.4.1.1)
Pyruvate carboxylase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01US8_SOLUE
13_2_20cm_scaffold_56_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(20864..22228)
DNA (1365bp) protein (455aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WM2_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85943.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_2_20cm_scaffold_56_23
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(22410..23033)
DNA (624bp) protein (208aa)
LexA repressor; K01356 repressor LexA [EC:3.4.21.88] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028R4_SOLUE
13_2_20cm_scaffold_56_24
unknown

Not on your lists

23462..24256
DNA (795bp) protein (265aa)

This feature has no annotations

13_2_20cm_scaffold_56_25
unknown

Not on your lists

comp(24320..24784)
DNA (465bp) protein (155aa)

This feature has no annotations

13_2_20cm_scaffold_56_26
Nocardia vulneris, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24907..25416
DNA (510bp) protein (170aa)
Anti-sigma-factor antagonist n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZ90_CONWI
Anti-anti-sigma regulatory factor {ECO:0000313|EMBL:KIA59655.1}; TaxID=1141657 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia vulneris.;"
anti-sigma-factor antagonist
13_2_20cm_scaffold_56_27
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

25684..27561
DNA (1878bp) protein (626aa)
korA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3) Tax=RBG_16_Acidobacteria_70_10_curated
2-oxoglutarate ferredoxin oxidoreductase subunit alpha id=3957116 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome rbh
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit
13_2_20cm_scaffold_56_28
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

27558..28586
DNA (1029bp) protein (343aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR8_9BACT
2-oxoglutarate ferredoxin oxidoreductase subunit beta Tax=RBG_16_Acidobacteria_70_10_curated
thiamine pyrophosphate domain-containing TPP-binding protein
13_2_20cm_scaffold_56_29
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

28792..30159
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003688DC5
serine phosphatase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
protein serine phosphatase with GAF(s) sensor(s)
13_2_20cm_scaffold_56_30
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(30252..31529)
DNA (1278bp) protein (426aa)
Peptidase M23 n=1 Tax=Desulfovibrio sp. X2 RepID=S7TWG8_9DELT
peptidase M23 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
peptidase M23
Displaying items 1-30 of 87 in total

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