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13_2_20cm_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_6_1
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..905)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F775_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EFK08365.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
hypothetical protein
13_2_20cm_scaffold_6_2
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(902..2164)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Rhodopirellula baltica SWK14 RepID=L7CD23_RHOBT
Uncharacterized protein {ECO:0000313|EMBL:ELP30976.1}; TaxID=993516 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula bal
transposase-like protein
13_2_20cm_scaffold_6_3
unknown

Not on your lists

comp(2161..2430)
DNA (270bp) protein (90aa)

This feature has no annotations

13_2_20cm_scaffold_6_4
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2590..4395)
DNA (1806bp) protein (602aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3); K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Acidobac
Sensor protein yycG (EC:2.7.13.3) id=14625803 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
phoR; phosphate sensor histidine kinase, HAMP and PAS domain-containing
13_2_20cm_scaffold_6_5
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(4385..5080)
DNA (696bp) protein (232aa)
response regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
DNA-binding response regulator id=4289387 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
two component transcriptional regulator
13_2_20cm_scaffold_6_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5266..7800)
DNA (2535bp) protein (845aa)
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:ABF42508.1}; EC=1.2.4.2 {ECO:0000313|EMBL:ABF42508.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae;
2-oxoglutarate dehydrogenase E1 component n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKU2_KORVE
sucA; 2-oxoglutarate dehydrogenase E1
13_2_20cm_scaffold_6_7
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7936..10479)
DNA (2544bp) protein (848aa)
AMP-dependent synthetase and ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMD0_KORVE
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
AMP-dependent synthetase/ligase
13_2_20cm_scaffold_6_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

10775..11881
DNA (1107bp) protein (369aa)
radical SAM protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003782B08
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ABJ84520.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usit
13_2_20cm_scaffold_6_9
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11878..12327
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000371073A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO32751.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain A
13_2_20cm_scaffold_6_10
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

12636..12839
DNA (204bp) protein (68aa)
Cold-shock DNA-binding protein family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QC1_SOLUE
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
cold-shock DNA-binding protein family protein
13_2_20cm_scaffold_6_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

12928..13188
DNA (261bp) protein (87aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
13_2_20cm_scaffold_6_12

Not on your lists

13269..13493
DNA (225bp) protein (75aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48358.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_2_20cm_scaffold_6_13
unknown

Not on your lists

13658..13849
DNA (192bp) protein (64aa)

This feature has no annotations

13_2_20cm_scaffold_6_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13919..14383)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003765560
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40454.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_2_20cm_scaffold_6_15
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(14605..15525)
DNA (921bp) protein (307aa)
lipoate synthase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] id=14430284 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
lipoate synthase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=CSP1_5_NC10
lipoyl synthase
13_2_20cm_scaffold_6_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(15760..16041)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027Q9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ82748.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_2_20cm_scaffold_6_17

Not on your lists

comp(16221..17048)
DNA (828bp) protein (276aa)
QlcA n=1 Tax=uncultured bacterium 259 RepID=E3T6S5_9BACT
QlcA {ECO:0000313|EMBL:ADC36019.1}; TaxID=698386 species="Bacteria; environmental samples.;" source="uncultured bacterium 259.;"
beta-lactamase domain protein
13_2_20cm_scaffold_6_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

17249..18922
DNA (1674bp) protein (558aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024F8_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83618.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_2_20cm_scaffold_6_19
unknown

Not on your lists

comp(18937..19266)
DNA (330bp) protein (110aa)

This feature has no annotations

13_2_20cm_scaffold_6_20
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(19631..20005)
DNA (375bp) protein (125aa)
RNP-1-like RNA-binding protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TWH3_ACIAC
rbp; RNA-binding protein Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
RNP-1-like RNA-binding protein
13_2_20cm_scaffold_6_21
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

20285..21898
DNA (1614bp) protein (538aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:AEB10803.1}; EC=6.2.1.26 {ECO:0000313|EMBL:AEB10803.1};; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marini
O-succinylbenzoate--CoA ligase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKP0_MARHT
13_2_20cm_scaffold_6_22
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(21907..23121)
DNA (1215bp) protein (405aa)
argJ; arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.35 2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFCSPHIGHO2_01_FULL_Acidob
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000378E901
13_2_20cm_scaffold_6_23
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(23221..24705)
DNA (1485bp) protein (495aa)
argH; argininosuccinate lyase (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
argH; argininosuccinate lyase (EC:4.3.2.1) id=14627101 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
argH; argininosuccinate lyase
13_2_20cm_scaffold_6_24
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(24779..25996)
DNA (1218bp) protein (406aa)
argininosuccinate synthase; K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=ASSY_ROSS1
13_2_20cm_scaffold_6_25
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(26107..27057)
DNA (951bp) protein (317aa)
ornithine carbamoyltransferase; K00611 ornithine carbamoyltransferase [EC:2.1.3.3] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4E9_ACIC5
13_2_20cm_scaffold_6_26
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(27063..28271)
DNA (1209bp) protein (403aa)
argD; acetylornithine transaminase (EC:2.6.1.11); K00818 acetylornithine aminotransferase [EC:2.6.1.11] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023W8_SOLUE
13_2_20cm_scaffold_6_27
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(28409..29242)
DNA (834bp) protein (278aa)
argB; acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Acetylglutamate kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=ARGB_KORVE
acetylglutamate kinase
13_2_20cm_scaffold_6_28
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(29239..30270)
DNA (1032bp) protein (344aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000372E71E
13_2_20cm_scaffold_6_29
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(30267..30716)
DNA (450bp) protein (150aa)
Arginine repressor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=ARGR_SOLUE
ArgR family transcriptional regulator
Arginine repressor {ECO:0000255|HAMAP-Rule:MF_00173}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus
13_2_20cm_scaffold_6_30
unknown

Not on your lists

30899..31246
DNA (348bp) protein (116aa)

This feature has no annotations

Displaying items 1-30 of 90 in total

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