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13_2_20cm_scaffold_62

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_62_1
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(177..455)
DNA (279bp) protein (93aa)
50S ribosomal protein L27 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=RL27_ACIC5
rpmA; 50S ribosomal protein L27
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
13_2_20cm_scaffold_62_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(554..862)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LHV2_HALO1
50S ribosomal protein L21
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_2_20cm_scaffold_62_3
unknown

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1197..1529
DNA (333bp) protein (111aa)

This feature has no annotations

13_2_20cm_scaffold_62_4
unknown

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comp(1614..1880)
DNA (267bp) protein (89aa)

This feature has no annotations

13_2_20cm_scaffold_62_5
unknown

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comp(2077..2256)
DNA (180bp) protein (60aa)

This feature has no annotations

13_2_20cm_scaffold_62_6

Not on your lists

2389..3534
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000372ED97 rbh
Uncharacterized protein {ECO:0000313|EMBL:CBI00246.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_2_20cm_scaffold_62_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

3531..4031
DNA (501bp) protein (167aa)
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1] id=14424554 bin=bin1_lowGC species=Mycobacterium hassiacum genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin1_lowGC organism_group=Unknown_CP
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1] Tax=CSP1_2_Dadabacteria
carbonic anhydrase
13_2_20cm_scaffold_62_8
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4321..4653
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037A63AE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO32594.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain A
13_2_20cm_scaffold_62_9
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

4650..5198
DNA (549bp) protein (183aa)
dsbD; Thiol:disulfide interchange protein; K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8] Tax=CG_Arma_02
Thioredoxin n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A1U1_MELRP id=5223742 bin=16ft_combo_ws3_JS1 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
thioredoxin
13_2_20cm_scaffold_62_10
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5525..7033)
DNA (1509bp) protein (503aa)
gltX1; glutamate--tRNA ligase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Glutamate--tRNA ligase 2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=SYE2_KORVE
glutamyl-tRNA synthetase
13_2_20cm_scaffold_62_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7810..9102
DNA (1293bp) protein (431aa)
multidrug resistance efflux pump-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein id=12554869 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
multidrug resistance efflux pump-like protein
13_2_20cm_scaffold_62_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

9099..10346
DNA (1248bp) protein (416aa)
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
RND family efflux transporter MFP subunit id=12554868 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RND family efflux transporter MFP subunit
13_2_20cm_scaffold_62_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10356..11663
DNA (1308bp) protein (436aa)
multidrug resistance efflux pump-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
multidrug resistance efflux pump-like protein id=12554867 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
multidrug resistance efflux pump-like protein
13_2_20cm_scaffold_62_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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11680..12960
DNA (1281bp) protein (427aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SG2_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ87408.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_2_20cm_scaffold_62_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

13119..14738
DNA (1620bp) protein (540aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035C919A
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABJ87407.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" s
13_2_20cm_scaffold_62_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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14911..18498
DNA (3588bp) protein (1196aa)
Diguanylate cyclase with GAF sensor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVB0_KORVE
GAF sensor-containing diguanylate cyclase
Diguanylate cyclase with GAF sensor {ECO:0000313|EMBL:ABF39190.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" sourc
13_2_20cm_scaffold_62_17
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(18520..19005)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I408_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL99995.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
13_2_20cm_scaffold_62_18
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

19167..19580
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I571_CALAS
OsmC family protein; K07397 putative redox protein Tax=RBG_16_Zixibacteria_43_9_curated
hypothetical protein
13_2_20cm_scaffold_62_19
RLO_PLX_64_10, Bacteria

Not on your lists

19841..20839
DNA (999bp) protein (333aa)
fabH; 3-oxoacyl-ACP synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
fabH; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4K5_ACIC5
13_2_20cm_scaffold_62_20
unknown

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21007..21594
DNA (588bp) protein (196aa)

This feature has no annotations

13_2_20cm_scaffold_62_21
unknown

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comp(21537..22085)
DNA (549bp) protein (183aa)

This feature has no annotations

13_2_20cm_scaffold_62_22
unknown

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22094..22363
DNA (270bp) protein (90aa)

This feature has no annotations

13_2_20cm_scaffold_62_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23347..23607)
DNA (261bp) protein (87aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVQ6_RHOP2
Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ABD07704.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobial
13_2_20cm_scaffold_62_24
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23677..23808)
DNA (132bp) protein (44aa)
Thiol peroxidase, Bcp-type {ECO:0000313|EMBL:EYF01968.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chond
13_2_20cm_scaffold_62_25
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(23934..25418)
DNA (1485bp) protein (495aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curat
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
glutamyl-tRNA amidotransferase subunit B n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000378D448
13_2_20cm_scaffold_62_26
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25432..25818)
DNA (387bp) protein (129aa)
Strain NCTC 7096 contig_275, whole genome shotgun sequence {ECO:0000313|EMBL:KIV51232.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneu
13_2_20cm_scaffold_62_27
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25897..26460)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00036BC017
Putative membrane protein {ECO:0000313|EMBL:KFZ88975.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
hypothetical protein
13_2_20cm_scaffold_62_28
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

comp(26450..27145)
DNA (696bp) protein (232aa)
hypothetical protein; K06927 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
protein of unknown function DUF71 ATP-binding region
ANH superfamily adenosine nucleotide alpha hydrolase id=4362642 bin=GWF2_Lentisphaerae_38_69 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
13_2_20cm_scaffold_62_29
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27376..29679)
DNA (2304bp) protein (768aa)
TonB-dependent receptor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II17_KORVE
TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
TonB-dependent receptor
13_2_20cm_scaffold_62_30
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(30026..30886)
DNA (861bp) protein (287aa)
putative Vitamin B12 import system, ATP-binding protein BtuD (EC:3.6.3.-); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] id=14627282 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
putative Vitamin B12 import system, ATP-binding protein BtuD (EC:3.6.3.-); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=CSP1_6_Rokubacteria
ABC transporter-like protein
Displaying items 1-30 of 43 in total

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