ggKbase home page

13_2_20cm_scaffold_65

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_65_1

Not on your lists

comp(2..940)
DNA (939bp) protein (313aa)
Gp3 protein n=3 Tax=root RepID=Q9JMN8_9VIRU
Gp3 protein {ECO:0000313|EMBL:BAA89629.1}; TaxID=112596 species="Viruses; unclassified phages.;" source="Wolbachia phage WO.;"
transposase
13_2_20cm_scaffold_65_2
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

2129..2383
DNA (255bp) protein (85aa)
Tax=RBG_16_RIF_CHLX_69_14_curated
13_2_20cm_scaffold_65_3
unknown

Not on your lists

comp(2466..2813)
DNA (348bp) protein (116aa)

This feature has no annotations

13_2_20cm_scaffold_65_4
unknown

Not on your lists

3124..3246
DNA (123bp) protein (41aa)

This feature has no annotations

13_2_20cm_scaffold_65_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4099..4500
DNA (402bp) protein (134aa)
ArsR family transcriptional regulator n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DC751
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABF42464.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_2_20cm_scaffold_65_6
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4497..4904
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363B0B9
Uncharacterized protein {ECO:0000313|EMBL:CCV12042.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
glyoxalase/bleomycin resistance protein/dioxygenase
13_2_20cm_scaffold_65_7
unknown

Not on your lists

comp(4858..5439)
DNA (582bp) protein (194aa)

This feature has no annotations

13_2_20cm_scaffold_65_8
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5696..5830
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GSP1_CUPNN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYS87122.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-
13_2_20cm_scaffold_65_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6222..6854
DNA (633bp) protein (211aa)
Peroxiredoxin-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITJ0_KORVE
peroxiredoxin-like Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
peroxiredoxin-like
13_2_20cm_scaffold_65_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7241..10213)
DNA (2973bp) protein (991aa)
Cna B-type protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKS4_KORVE rbh
Cna B-type protein
Cna B-type protein {ECO:0000313|EMBL:ABF42526.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ell
13_2_20cm_scaffold_65_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10257..11492)
DNA (1236bp) protein (412aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKS3_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42527.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_2_20cm_scaffold_65_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

11768..12148
DNA (381bp) protein (127aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_2_20cm_scaffold_65_13
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12520..12732
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIF1_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV25311.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain AT
13_2_20cm_scaffold_65_14
unknown

Not on your lists

comp(12985..13227)
DNA (243bp) protein (81aa)

This feature has no annotations

13_2_20cm_scaffold_65_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(13304..13642)
DNA (339bp) protein (113aa)
Caa(3)-type oxidase, subunit IV n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UX5_SOLUE
caa(3)-type oxidase subunit IV Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
caa(3)-type oxidase subunit IV
13_2_20cm_scaffold_65_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(13656..14453)
DNA (798bp) protein (266aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036276F7
cytochrome c oxidase subunit III
13_2_20cm_scaffold_65_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14480..15223)
DNA (744bp) protein (248aa)
Heme/copper-type cytochrome/quinol oxidase subunit 3-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ26_KORVE
Heme/copper-type cytochrome/quinol oxidase subunit 3-like
Heme/copper-type cytochrome/quinol oxidase subunit 3-like protein {ECO:0000313|EMBL:ABF41024.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribact
13_2_20cm_scaffold_65_18
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(15231..16961)
DNA (1731bp) protein (577aa)
cytochrome-c oxidase (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
cytochrome-c oxidase (EC:1.9.3.1)
Cytochrome-c oxidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UX8_SOLUE
13_2_20cm_scaffold_65_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(16963..17772)
DNA (810bp) protein (270aa)
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Cytochrome c oxidase, subunit II n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UX9_SOLUE
cytochrome c oxidase subunit II
13_2_20cm_scaffold_65_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

18451..19107
DNA (657bp) protein (219aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YB6_SOLUE
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ABJ85349.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter
13_2_20cm_scaffold_65_21
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

19144..20136
DNA (993bp) protein (331aa)
Cytochrome b/b6, N-terminal domain n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YB7_SOLUE
cytochrome b/b6 domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
cytochrome b/b6 domain-containing protein
13_2_20cm_scaffold_65_22
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

20139..21068
DNA (930bp) protein (310aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YB8_SOLUE rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_2_20cm_scaffold_65_23
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

21078..24362
DNA (3285bp) protein (1095aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YB9_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_2_20cm_scaffold_65_24
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

24404..25180
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YC0_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_2_20cm_scaffold_65_25
unknown

Not on your lists

25306..25533
DNA (228bp) protein (76aa)

This feature has no annotations

13_2_20cm_scaffold_65_26
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

25675..26595
DNA (921bp) protein (307aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VB4_SOLUE
biotin/lipoyl attachment domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
biotin/lipoyl attachment domain-containing protein
13_2_20cm_scaffold_65_27
unknown

Not on your lists

comp(26592..26960)
DNA (369bp) protein (123aa)

This feature has no annotations

13_2_20cm_scaffold_65_28

Not on your lists

comp(27226..28590)
DNA (1365bp) protein (455aa)
Putative Phospholipase C {ECO:0000313|EMBL:CBI02579.1}; EC=3.1.4.3 {ECO:0000313|EMBL:CBI02579.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine dra
Putative Phospholipase C n=1 Tax=mine drainage metagenome RepID=E6Q5V8_9ZZZZ
Phospholipase C
13_2_20cm_scaffold_65_29
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

29031..31004
DNA (1974bp) protein (658aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363603F
peptidase M48, Ste24p
Peptidase M48, Ste24p {ECO:0000313|EMBL:ABF42216.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
13_2_20cm_scaffold_65_30
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(31055..31723)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI0003738C88
transposase Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
integrase catalytic subunit
Displaying items 1-30 of 39 in total

View Taxonomy